Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61748g00001 TGTTTGGGTAGTGTTCTATCTGTTGGTAAGGTGTATCCAGGATTCAGTGGTGCTCAAATGAATTGGATTGATAGGGATGGCAAGTTCCTTGTATCAGACAGTGGGAAATTCACCTTTGGATTTGTCACTACTGCCAATGATAATACACAGTTCCTACTAGAGATTGTTCATGTGAAGAGCAACACTCCGATCTGGACCGCGAATCAAGCAGTTCCCGTTGCAAATTCTGACGATTTTGTGTTTGATGAGAAGGGAAATGCTGTCTTGAAGAAGGGTGGAACAGTTGTATGGTCTACAAACACAAGTGGCAAGGGTGTTTCTTCAATGGAATTGCAAGACAATGGAAATTTGGTGTTGCTTGGAAAGGATAATACAACAGTTATATGGCAGAGTTTCAATTATCCAACAAATACATTGTTGCAAGATCAGAACTTCACAGAGGGAATGAAACTAATCAGTGATCCTGGCCCCAACAACTTGACCTATTCTCTTGAGATGAATTCAGGCAATGTCATGCTCTATGCTGGTTTCAAGACTCCTCAGCCTTATTGGTCTATGCAGACTGATAACCGCAAGATCATCAATCAAAACGGCGGTGTGGTGGCTTCGGCAACACTTGGCGAAAATTCCTGGAGGTTCTATGACAAGGGCAGGGCTTTGTTGTCACAATTCATTTTTGATGATGGTTCAGGTTCAGGTAATAGCACTTGGGTTGCTGTCTTGGGAACAAATGGATTAATCACTTTCTTTGATCTTGAAGGTGGAGGATCAAATTCGCCTTCCAAGACAACAATACCACAAGGATCTTGCAATACTCCTGAACCTTGTGATCCATATAGCATATGCACAGGGGCCAATGGGAAGTGCAACTGCCCTTCTGTTCTGCCTAGTTGCAAGCCGGGTTTCGCCTCTGCCTGCGACGATAGCTCCAAGACCTTGGTGAAAGGTGATGATGGACTCAGTTACTTTGCACTCCAATTTCTTAAGCCGTTTCCGAAGACAAATTTGGAAGCTTGCCAAAAATCTTGCAATGGAAATTGCTCATGCCTTGCCATGTTCTTCCACCTTAGTTCAGGAAACTGTTTCCTATTGGACAGCATAGGTAGTTTTCAGAAGCTTAGCACTGATTCTGGTTATGTTTCTTACATCAAAATCTCTAGTGATGGAAGAGGTAATAGCAATGGGGGAAGTGGAGGTGGAAGTAGCAATAAGCACACTATAGTCACGGTGATCATTGTCATAGTAACATTGCTTGTGATTTCTGGCTTGCTCTTTGTGGGAATTAGGTACTACCGGAGGAAGCGAAGTTTACCCGAATCACCACAGGAGAATTCAGAAGAGGACAACTTCCTGGAGAATCTAACAGGTATGCCGATCCGTTACAGCTACAAGGATCTAGAAGCTGCTACAAATCACTTCTCTGTGAAGCTTGGACATGGCGGTTTTGGCTCGGTTTACAAAGGAGTGCTGCCGGATCGGACTCAAGTAGCAGTGAAGAAGTTGGAAGGTATTGGCCAAGGGAAGAAAGAGTTTAGAGCTGAAGTTAGCATCATCGGAAGCATCCATCACTTGCATTTGGTTAGGCTCAGAGGTTTCTGCGTAGAAGGGACTCACAAGCTTCTTGTTTATGAGTACATGGCCAATGGATCATTGGACAAGTGGATATTCAAGAAGAACAATGGCGAGTTTCGGTTGGATTGGGATACAAGGTTCAACATAGCGCTCGGCACAGCTAAAGGTCTTGCTTACCTTCACGACGATTGTGACTCAAAGATCATCCATTGTGACATAAAACCAGAAAATGTGCTTCTAGATGATCATTTCATGGCAAAAGTCTCCGATTTCGGCCTGGCTAAGCTCATGAACCGAGAGCAAAGCCATGTCTTCACAACACTGAGAGGAACTCGAGGGTACCTCGCCCCCGAGTGGATAACAAACTATGCCATATCAGAGAAAAGTGATGTTTACAGCTACGGAATGGTGCTGCTGGAGATCATCGCCGGAAGGAAAAACTATGATCCGTCGGAAACCTCAGAGAAATCGCATTTCCCAAGCTACGCTATGAAGATGATGGAAGAAGGGAAACTGAAGGAAATCCTTGATTCAGAGTTGATAGAAGATATGAATGATGAAAGGGTTCATATAGCTATTAAAGTTGCAATGTGGTGCATACAAGAAGACATGGCAATGAGGCCTTCAATGACCAAAGTAGTGCAAATGCTGGAAGGTCTTTGCACTGTTCCTAAGCCACCAACAAGTTCTGCTAACTTGGGTTCTCGCCTTTTCACCAATGTCTTCAATCTCAGTGAAGGAGGCACAACTTCTTCAGGTCCATCAGATTGTAACAGTGATGCATATCTCTCTGCTGTTCGCCTTTCAGGACCAAGATAG 2391 0.4404 CLGSVLSVGKVYPGFSGAQMNWIDRDGKFLVSDSGKFTFGFVTTANDNTQFLLEIVHVKSNTPIWTANQAVPVANSDDFVFDEKGNAVLKKGGTVVWSTNTSGKGVSSMELQDNGNLVLLGKDNTTVIWQSFNYPTNTLLQDQNFTEGMKLISDPGPNNLTYSLEMNSGNVMLYAGFKTPQPYWSMQTDNRKIINQNGGVVASATLGENSWRFYDKGRALLSQFIFDDGSGSGNSTWVAVLGTNGLITFFDLEGGGSNSPSKTTIPQGSCNTPEPCDPYSICTGANGKCNCPSVLPSCKPGFASACDDSSKTLVKGDDGLSYFALQFLKPFPKTNLEACQKSCNGNCSCLAMFFHLSSGNCFLLDSIGSFQKLSTDSGYVSYIKISSDGRGNSNGGSGGGSSNKHTIVTVIIVIVTLLVISGLLFVGIRYYRRKRSLPESPQENSEEDNFLENLTGMPIRYSYKDLEAATNHFSVKLGHGGFGSVYKGVLPDRTQVAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVRLRGFCVEGTHKLLVYEYMANGSLDKWIFKKNNGEFRLDWDTRFNIALGTAKGLAYLHDDCDSKIIHCDIKPENVLLDDHFMAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIAGRKNYDPSETSEKSHFPSYAMKMMEEGKLKEILDSELIEDMNDERVHIAIKVAMWCIQEDMAMRPSMTKVVQMLEGLCTVPKPPTSSANLGSRLFTNVFNLSEGGTTSSGPSDCNSDAYLSAVRLSGPR 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61748g00001 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672|GO:0006468
Stsc61748g00001 796 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 22 752 - -
Stsc61748g00001 796 FunFam S-receptor-like kinase 5 546 750 - -
Stsc61748g00001 796 Gene3D Phosphorylase Kinase; domain 1 436 545 - -
Stsc61748g00001 796 SMART blect_4 21 135 IPR001480 -
Stsc61748g00001 796 Pfam D-mannose binding lectin 62 145 IPR001480 -
Stsc61748g00001 796 Pfam Protein kinase domain 474 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61748g00001 796 ProSiteProfiles Bulb-type lectin domain profile. 15 132 IPR001480 -
Stsc61748g00001 796 SUPERFAMILY Protein kinase-like (PK-like) 452 742 IPR011009 -
Stsc61748g00001 796 ProSiteProfiles Protein kinase domain profile. 471 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61748g00001 796 ProSitePatterns Protein kinases ATP-binding region signature. 477 500 IPR017441 GO:0005524
Stsc61748g00001 796 Gene3D - 21 134 IPR036426 -
Stsc61748g00001 796 FunFam Serine/threonine-protein kinase 17 133 - -
Stsc61748g00001 796 PIRSF SRK 2 785 IPR024171 GO:0004674
Stsc61748g00001 796 CDD B_lectin 23 135 IPR001480 -
Stsc61748g00001 796 SMART serkin_6 471 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61748g00001 796 FunFam serine/threonine-protein kinase PBS1-like 439 545 - -
Stsc61748g00001 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 188 IPR036426 -
Stsc61748g00001 796 CDD PAN_AP_plant 334 386 - -
Stsc61748g00001 796 Gene3D Transferase(Phosphotransferase) domain 1 546 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61748g00001 Stsc-Chr61748 4524 7115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61748g00001 418 753 Receptor kinase-like Gene Family AT5G20050 45.938 6.77e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Stsc61748g00001 Pkinase 1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61748g00001 - - gmx:100791158 1217.99