Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61736g00003 ATGAGATTTGAGAAGCTAGATACTGTATTCTCGAATATCCAGAGATGCATTAATAAAAGCCCCCATAAAGCCAAAGAGAGAAGACTAACTAACTTCACAATTCACATGATGCCATCACACCACCAGTCCACGTCAGCACCCACCAACAAACCCCAAAACCATCTCTTCTCCTCCGCCTCCTCTTTCTTCCTCCTCCTATTCTTCTGCGTTCGAAACCCAACAAGGAAGAACCACCGAACAACTCCATCTTCTGACTCCGACTCCAACCCTCCACACCGCTTCTCCTACTCCCTCCTCCGCCGCGCAACCAACTCCTTCTCCACCACCCTCGGCCACGGAGGCTTCGGCCCTGTCTTCTCCGCTTCCCTCGCCGGAAAACCCCTCGCCGTCAAGCTCATGGACTCCTCTGCTTCTCTCCAAGGGGAGCGCGAGTTCCACAACGAGCTCCTCTTCGCTTCCAGGCTCCTCCGTTCGAACTCCTCCTCCACGTGCCGTCACGTGGTCCCTGCCATAGGTTTCGCCTCCGATCCCAAACGGCGCCGTTTCCTCATCGTCTACGACCTCATGCACAACGGCAACCTCCACGACGCTCTCCTCCGCCGAAAATCCCCTGAGCTCATGCGATGGCAAACGAGATTCTCCGTTGCTCTGGACGTCGCGAGAGGGATACAGTTTCTTCACTCTTGCGATCCTCCGGTGATCCACGGCGATATCAAGCCCAGTAATATTCTCTTGGACCGGTCCTTTGCGGCCAAGATCGGAGACTTTGGACTTGCGAGGTTCAAGACGGAGAACAGGTTGGAAGCTGAGGTTTTGGGGTGCGAGAGTGATGGTGCTTCTGTTTTTGAGGAGCAATCTCCGGAAGGACCGGTTACGTCGCCTGTTGCGGTTGGGAAGAAGAATGGGAAGGGTGTTGAGGGCAATTTGGTAAATCAAGAGAATGGAGGTTCCTCGGGTGCTATGGTGAAGGATTATGTGATGGATTGGATTGGAAATGATGTTGGAATGCAGAGACCCAAAGGTGAGTGGATTGCTTCTGCTTCTGCTGCTTCTACCAGTGGAAAGGAAGAGAGCAATAACAACAAGAAGAAGAAGAACAAGAGTAATAGTATTAGTAGTAGTAGGAGGAGGAAACTGGAATGGTGGGAATCTATGGATGATGAGGATGGTGATGTTTTGAAGAAGGAGAGAAGAAGGCCTGTCAGGGAATGGTGGAAGGAGGAGTATTCTCAAGAGCTGGCTAGCAAGAACAAGAAAAATAAAAAGAAGAAAGAAAAGAATAGAAAAGGTGCAGAGAATGATGATGGGAATGTTGATGATTGGTGGTTCAGAGATGGTGATGCCAAGAAGATCAAGAAAAGCGGTAGCAGGAACAGCGTGGATTCATGGCTAGACGATGGTGAAATCCCCAAGAGTGGCGCTATGAGCAGCAATCAAAGCATGAGAGGGACAGTGTTCTATGTTGCTCCAGAGTATGGTGGAGATGCGTCGGAGAAGTCCGATGTATACAGTTTTGGCGTGCTATTGCTTGTAATAGTGTCTGGGAGGCGTCCATTAGAGGTGACTACTGGTTCGCCATTGTCGAGCAGTGAGTTTCAGAGAGCGAATCTTGTGTCGTGGGCCCGCCATTGCGCCCGGAAAGGGAAGCTTCTTGATCTTGTTGATGAATCAATTCAGGGTTTGGATAGAGAGCAGGCTCTGCTGTGTATCAAGGTTGCGTTGCTCTGTTTGTTGAAGTCACCGTCTCGTCGTCCTTCAATGGAAGAGGTTGTAAGGATGCTTAGTGGGGAATTGGAGCCGCCCCAATTGCCCCTTCACTATTCATCTTCATCATCCATTCAACAGTGA 1848 0.5038 MRFEKLDTVFSNIQRCINKSPHKAKERRLTNFTIHMMPSHHQSTSAPTNKPQNHLFSSASSFFLLLFFCVRNPTRKNHRTTPSSDSDSNPPHRFSYSLLRRATNSFSTTLGHGGFGPVFSASLAGKPLAVKLMDSSASLQGEREFHNELLFASRLLRSNSSSTCRHVVPAIGFASDPKRRRFLIVYDLMHNGNLHDALLRRKSPELMRWQTRFSVALDVARGIQFLHSCDPPVIHGDIKPSNILLDRSFAAKIGDFGLARFKTENRLEAEVLGCESDGASVFEEQSPEGPVTSPVAVGKKNGKGVEGNLVNQENGGSSGAMVKDYVMDWIGNDVGMQRPKGEWIASASAASTSGKEESNNNKKKKNKSNSISSSRRRKLEWWESMDDEDGDVLKKERRRPVREWWKEEYSQELASKNKKNKKKKEKNRKGAENDDGNVDDWWFRDGDAKKIKKSGSRNSVDSWLDDGEIPKSGAMSSNQSMRGTVFYVAPEYGGDASEKSDVYSFGVLLLVIVSGRRPLEVTTGSPLSSSEFQRANLVSWARHCARKGKLLDLVDESIQGLDREQALLCIKVALLCLLKSPSRRPSMEEVVRMLSGELEPPQLPLHYSSSSSIQQ 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61736g00003 615 Coils Coil 406 434 - -
Stsc61736g00003 615 SMART serkin_6 104 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61736g00003 615 MobiDBLite consensus disorder prediction 281 317 - -
Stsc61736g00003 615 Gene3D Transferase(Phosphotransferase) domain 1 95 281 - -
Stsc61736g00003 615 ProSiteProfiles Protein kinase domain profile. 104 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61736g00003 615 SUPERFAMILY Protein kinase-like (PK-like) 88 608 IPR011009 -
Stsc61736g00003 615 MobiDBLite consensus disorder prediction 345 377 - -
Stsc61736g00003 615 MobiDBLite consensus disorder prediction 413 439 - -
Stsc61736g00003 615 Pfam Protein tyrosine and serine/threonine kinase 106 264 IPR001245 GO:0004672|GO:0006468
Stsc61736g00003 615 Gene3D Transferase(Phosphotransferase) domain 1 448 601 - -
Stsc61736g00003 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Stsc61736g00003 615 PANTHER OS07G0586332 PROTEIN 311 612 IPR044576 -
Stsc61736g00003 615 MobiDBLite consensus disorder prediction 451 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61736g00003 Stsc-Chr61736 13955 15802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61736g00003 471 594 Receptor kinase-like Gene Family AT3G58690 34.615 5.90e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Stsc61736g00003 PK_Tyr_Ser-Thr 3.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61736g00003 - - aprc:113872924 608.216