LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc61735g00002	ATGTTACGCCAAGTTATGGGAAACGATTTTGCAGCACATTCCCTGTTCAGAAGTTACAACCGGAGCTTCAATGGGTTTTCTGCAAAACTAACAGAACAAGAAGCGCATAATCTTGCTACAATGGATGAAGTAGTCTCTGTTTTCCCGAGCAAAACTTTGCAGCTTCATACAACAAGGTCTTGGGACTTCATGGGTTTCCAAGACAAAAGGCAAATTAGTCCTGCGGAAAGCAATATCATAATTGGAGTCTTAGATTCCGGTATTTGGCCCGAATCGGATAGTTTTTCCGACCTTGGCTTCGGCTCGGTTCCAAAAAAGTGGAAAGGTACATGCGCTGGAGGGAGCAATTTTACTTGTAACAAGAAGGTGATTGGAGCGAGAAAATACAACGACGAAGATGGATCGTCCTCAAGAGACAATGTTGGTCATGGAAGCCATACAGCATCAATAGCAGCTGGTAACAAAGTTAAAGATGCAAGCTTTTACGGGATTGCAAATGGAACTGCAAAAGGAGGGGTGCCATCTTCAAGATTAGCAGTCTACCAAGTTTGCATAACCGAGTTTTGCATTGAGGCTGCCATATTAGCAGCTTTTGATGATGCTATCGCAGACGGTGTAGATCTCATCACAATTTCACTTGGTCGTGGAGTGGCGGTAGATATCAAGACGGATGTAATATCAATTGGTTCTTTTCATGCAATGGAGAAAGGGATACTCACTGTCCATTCATGTGGAAACAGTGGTCCTGATAGAGAGACTACTAGTAGCGTAGCACCTTGGTTACTAAGTGTTGCAGCTAGCACCATGGATCGGAGAATCATTGACAAATTTTCCCTTGGAAATGGACAAATATTTTATGGGAGATCGATAAATAGTTTCGTATCAAGTGGGCAAAAGATTCCTTTACTTCCCGGGGAGCATGCTTCGCTTCCGGGTTGCGATGGTGCAACCTGTGATTGTCTTGATCCCAAGAAAGTAAAAGGAAAAATACTTTTATGCTCATCAGAAGAAGGGATTCAAATGGGTTATTATTATGGCGCGTTTGGATCAATTGTGAATAGCTCTGACCAAGAAGCCGATGTTGTTCCTTATCCTGCATCAAGAATTGATAATATCACATACGCTCATGTTTTGTCTTATGCTAATTCTACTAATACCTCTCAAGTGGAGATACTCAAGAGTGAAGCCATGAATGATCCTAATGCTCCATATATAGCTGATTTCTCTTCCAGAGGACCAAACCCATTAATCCCAGAAATTTTAAAGCCAGACATAACTGCCCCCGGAGTTGAAATATTGGCAGCTTTTTCGCCTAATGGGAATCCCTCGGGGATCGACGGAGATAACAGGCATGTGAAATACAATATACTGACGGGAACATCAATGTCATGCCCCCATGTTACTGCTATAGCCGCATATGTTAAGAGTTTTCATCCTTATTGGTCGCCGGCTGCTATAAAGTCTTCTATTATGACTACTGCAGTGCCAATGAATAGTAGTAATCAAGTTCTTAAGGATTTTGCTTATGGAGCAGGGCATGTGGATCCATTGAAAGTCATCAACCCTGGGCTCATTTTGGATCTTTCCAAAGATGACTATGTGAATTTGTTATGTGACATAGGGTATGATACTCCAACAGTGAGAAAAATAAGTGGTGATAATAGCACATGTCCTTCTTCAAGTGCAAGATCATTGCTCAAAGATATTAACTATCCTTCAATTGTATATCAAGTCCAACTAATGCAACCGTTTATGGCCAATTTCACAAGAACAGTCACAAATGTTGGCTTTGCTAATTCCACCTACAAAGCAAGTGTCATGAAAAGTTCCAACATCAGCATCAACATCGTCCCTCAAGTTCTCTCATTCAAATATCTTGGTGAAAAACAATCATTCAGTGTCAATGTTGCTGGAGGAAAGTTTTCTGAGCCAATTGTACTCTCCTCATCACTTATATGGACAGATGGAGAACATAGTATGAGGATTCCTATTATTGTAGACTTCACCCAAACTTGA	2016	0.4122	MLRQVMGNDFAAHSLFRSYNRSFNGFSAKLTEQEAHNLATMDEVVSVFPSKTLQLHTTRSWDFMGFQDKRQISPAESNIIIGVLDSGIWPESDSFSDLGFGSVPKKWKGTCAGGSNFTCNKKVIGARKYNDEDGSSSRDNVGHGSHTASIAAGNKVKDASFYGIANGTAKGGVPSSRLAVYQVCITEFCIEAAILAAFDDAIADGVDLITISLGRGVAVDIKTDVISIGSFHAMEKGILTVHSCGNSGPDRETTSSVAPWLLSVAASTMDRRIIDKFSLGNGQIFYGRSINSFVSSGQKIPLLPGEHASLPGCDGATCDCLDPKKVKGKILLCSSEEGIQMGYYYGAFGSIVNSSDQEADVVPYPASRIDNITYAHVLSYANSTNTSQVEILKSEAMNDPNAPYIADFSSRGPNPLIPEILKPDITAPGVEILAAFSPNGNPSGIDGDNRHVKYNILTGTSMSCPHVTAIAAYVKSFHPYWSPAAIKSSIMTTAVPMNSSNQVLKDFAYGAGHVDPLKVINPGLILDLSKDDYVNLLCDIGYDTPTVRKISGDNSTCPSSSARSLLKDINYPSIVYQVQLMQPFMANFTRTVTNVGFANSTYKASVMKSSNISINIVPQVLSFKYLGEKQSFSVNVAGGKFSEPIVLSSSLIWTDGEHSMRIPIIVDFTQT	671

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc61735g00002	671	Gene3D	-	270	398	-	-
	Stsc61735g00002	671	Pfam	Peptidase inhibitor I9	9	56	IPR010259	-
	Stsc61735g00002	671	CDD	Peptidases_S8_3	53	495	IPR034197	-
	Stsc61735g00002	671	Gene3D	-	537	668	-	-
	Stsc61735g00002	671	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	1	56	IPR037045	-
	Stsc61735g00002	671	Pfam	Subtilase family	77	512	IPR000209	GO:0006508\|GO:0008236
	Stsc61735g00002	671	Pfam	Fibronectin type-III domain	568	666	IPR041469	-
	Stsc61735g00002	671	ProSitePatterns	Serine proteases, subtilase family, serine active site.	459	469	IPR023828	-
	Stsc61735g00002	671	PRINTS	Subtilisin serine protease family (S8) signature	139	152	IPR015500	-
	Stsc61735g00002	671	PRINTS	Subtilisin serine protease family (S8) signature	458	474	IPR015500	-
	Stsc61735g00002	671	PRINTS	Subtilisin serine protease family (S8) signature	76	95	IPR015500	-
	Stsc61735g00002	671	Gene3D	Peptidase S8/S53 domain	78	533	IPR036852	GO:0004252\|GO:0006508
	Stsc61735g00002	671	CDD	PA_subtilisin_like	277	391	-	-
	Stsc61735g00002	671	ProSiteProfiles	Serine proteases, subtilase domain profile.	60	520	-	-
	Stsc61735g00002	671	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	15	666	IPR045051	-
	Stsc61735g00002	671	SUPERFAMILY	Subtilisin-like	55	524	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc61735g00002	Stsc-Chr61735	11958	14376	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Stsc61735g00002	1	666	Subtilisin-like Serine Gene Family	AT3G46850	53.148	0.0	699

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc61735g00002	-		-	qsa:O6P43_020998	773.081