Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61701g00001 ATGGCAGATGAGGTAGTTCTGCTAAGTTTCTGGTGCAGTCCATTTTGTCTGAGGGTAAGAATTTCACTTGCTGAAAAGGGTATTACGTATGAGTACAAAGAGGAGGACTTGATGGGGAACAAGAAAAGCCCATTATTGCTACAAGTGAACCCGGTTCATAAGAAGGTTCCAGTTCTCATCTACAATGGAAAACCTGTTTGTGAGTCTCTTAATATTGTTGAATATATTGATCAAGTGTGGAGTGATACATCTCCATTGATGCCTTCTGATCCTTATCAAAGAGCTCAGGCTAGATTTTGGGCTGACTATGTTGACAAGAAGATTGATGATTCTCAAAGCAAGTTACTTTTGGCGAGAAAAGAAGAACAAGAAGCTGCCAAGAAGTCCTTCTTGGACGTCCTTAAATTGTTGGAGGAACAACTTGGGGATAAGACTTATTTTGGAGGAGACAAGTTTGATTTTGGAGACATAGCATTTGTTCCATACTACTGTTGTTTTAAAACCTATGAGACCCTTGGAAACTTCAAAATGGTAGAAGAGTGTCCCAAACTTATTGCTTGGGCTAAGAGGTGCATGGAGAAGGAAAGTGTATCCAAGTGTCTCCCGGATCCACGAACAGTCTATGAGCTCTTTGTGGAGGTGAGGAAAAAGTTTGGAGTACAATAA 666 0.4054 MADEVVLLSFWCSPFCLRVRISLAEKGITYEYKEEDLMGNKKSPLLLQVNPVHKKVPVLIYNGKPVCESLNIVEYIDQVWSDTSPLMPSDPYQRAQARFWADYVDKKIDDSQSKLLLARKEEQEAAKKSFLDVLKLLEEQLGDKTYFGGDKFDFGDIAFVPYYCCFKTYETLGNFKMVEECPKLIAWAKRCMEKESVSKCLPDPRTVYELFVEVRKKFGVQ 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61701g00001 221 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Stsc61701g00001 221 Gene3D Glutaredoxin 1 89 - -
Stsc61701g00001 221 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Stsc61701g00001 221 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Stsc61701g00001 221 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Stsc61701g00001 221 FunFam Tau class glutathione S-transferase 1 89 - -
Stsc61701g00001 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 209 IPR045073 -
Stsc61701g00001 221 SFLD Glutathione Transferase (cytosolic) 2 219 IPR040079 -
Stsc61701g00001 221 Coils Coil 120 140 - -
Stsc61701g00001 221 CDD GST_N_Tau 5 80 - -
Stsc61701g00001 221 FunFam Glutathione S-transferase U20 90 221 - -
Stsc61701g00001 221 Gene3D - 90 221 - -
Stsc61701g00001 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Stsc61701g00001 221 CDD GST_C_Tau 91 211 IPR045074 GO:0004364|GO:0006749
Stsc61701g00001 221 Pfam Glutathione S-transferase, C-terminal domain 119 194 IPR004046 -
Stsc61701g00001 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 218 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61701g00001 Stsc-Chr61701 1211 2311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61701g00001 1 218 Glutathione S-transferase Gene Family AT1G78380 58.716 1.52e-95 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61701g00001 K00799 - gmx:547520 318.161