Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61696g00001 ATGGAAGCAACATGGGTCACAGCTATTGCGGTGACTGCGGTGACAGCGGTGATTGTTGCAGTGGTATCAGGATGGAAGGTGCTGAATTGGTTGTGGCTAACACCAAAGAAGCTTGAGAAACTGTTGAGAGAACAAGGCTTCCAAGGCAATCCGTACAGGATTCTGGTTGGGGATACTGAAGATATTCAGAAGATGCTAAAACAATCTCAATCTAAACCCATGGATGTATCTGATGATGATATTTTGCAACGTTTCTTATGCCATGTTCAGCAGAGTATAAACAAATACGGTAAAAATTCATTTATTTGGTTTGGACCAAAACCGAGGGTGATCATTACAGATCCTGAGTTAATCAAAGATGCATTAAACAAGATTCATGACTTTCAAAAACCTCATTCAAATCCACTTGTTCGTTTGCTAGCTGGTGGTCTCGTCAGTTACGAGGGTGAGAAATGGAGCAGACATAGAAGAATAATCAATCCAGCATTCACTTCAGAAAACATCAAGATTATGATGCCAGCATTCTTGAAAAGTTGTACTGATATGATTAATAAATGGGAGGGAATGTTGTCTTCAGATGGATCATGTGAAATTGATGTTTGGCCTTTCCTTCAAACTTTGACTAGTGATGTAATTTCTCGAGCTGCATTCGGAAGTAGTTACGAGGAAGGGATTAGAATATTTGATCTTCAGAAGGAGCAAGCTCAACTCGCAATGAAGGTTCTGATGAAAGTTTACATTCCTGGATGGAGGTTCGTACCTACCAAGATCAACAGAAGGATGAAGGAGATCGATAGAGATATAAAAAATTCACTTAAGGTTATGATTAACAATAGAGAGAAAGCAATGAAGACAGGTGAAGTTACTAAGAGCAATGACTTGTTGGGCCTACTTTTGGAATCAAATCATAAGGAGATTCATGATCATGGTGGAAACAACAAGAACATTGGAATGAGTCTTGATGATGTAATTGAAGAGTGCAAACTATTCTATTTTGCTGGTGAAGAGACAACATCTACTCTGCTTGTTTGGACTATGGTGTTATTGAGCAGGTACCCTGATTGGCAAGCACGTGCAAGGGAGGAAGTCTTACAAGTCTTTGGAAATCAAACGCCTAACTTTGAGGGGTTGAGTCATCTTAAAATTGTTGCCATGATATTTTATGAGGTTATGAGATTATACCCACCAGTAATTGGGCTTGTTCGACTTACTCACAAAGATATCAAACTTGGGAACTTAACATTGCCTGCGGGAGTTCAACTTTCCTTGCCAACACTTTATGTTCATCATGATCCCCAACTTTGGGGTGACAATGCAAAGGAATTCAACCCTGCACGATTTTCCGAAGGAGTTTTAAAGGCAACAAATGGCAGAGTTTCTTTTTTTCCTTTTGGATGGGGTCCTAGAATATGCCTTGGACAAAACTTTGCCATAGTTGAAGCAAAATTGGCTGTGTCTTTCATTTTACAACATTTCTGGTTTGAACTTTCTCCATCCTATACTCATGCTCCTGCCAATGTGATTACTCTTCAACCACAATATGGTGCTCATATCATTCTACACAAGGTGCAAAAAGCTTGA 1581 0.3953 MEATWVTAIAVTAVTAVIVAVVSGWKVLNWLWLTPKKLEKLLREQGFQGNPYRILVGDTEDIQKMLKQSQSKPMDVSDDDILQRFLCHVQQSINKYGKNSFIWFGPKPRVIITDPELIKDALNKIHDFQKPHSNPLVRLLAGGLVSYEGEKWSRHRRIINPAFTSENIKIMMPAFLKSCTDMINKWEGMLSSDGSCEIDVWPFLQTLTSDVISRAAFGSSYEEGIRIFDLQKEQAQLAMKVLMKVYIPGWRFVPTKINRRMKEIDRDIKNSLKVMINNREKAMKTGEVTKSNDLLGLLLESNHKEIHDHGGNNKNIGMSLDDVIEECKLFYFAGEETTSTLLVWTMVLLSRYPDWQARAREEVLQVFGNQTPNFEGLSHLKIVAMIFYEVMRLYPPVIGLVRLTHKDIKLGNLTLPAGVQLSLPTLYVHHDPQLWGDNAKEFNPARFSEGVLKATNGRVSFFPFGWGPRICLGQNFAIVEAKLAVSFILQHFWFELSPSYTHAPANVITLQPQYGAHIILHKVQKA 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61696g00001 526 CDD CYP72 88 519 - -
Stsc61696g00001 526 PANTHER CYTOCHROME P450 FAMILY MEMBER 23 516 - -
Stsc61696g00001 526 FunFam Cytochrome P450 734A1 32 524 - -
Stsc61696g00001 526 Gene3D Cytochrome P450 78 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 Pfam Cytochrome P450 91 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 SUPERFAMILY Cytochrome P450 84 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Stsc61696g00001 526 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61696g00001 526 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61696g00001 Stsc-Chr61696 2898 15844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61696g00001 9 523 Cytochrome P450 AT3G14690 55.877 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61696g00001 - - aip:107613584 899.427