Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61692g00001 ATGGCCCTCGTCCGCCATCGCCGTCACCTTAATCTCCGCCTCCCCCTTCCAGAACCTTCCGAACGCTGTCTACGCTTTCCTCTCCCGCAACCCACAACAACCGCCGCCAAATCCTTCTCCACAACCGCCGCCTCTTCCGGTGACGTTATCTTCCCCGGCGACATCGAGAAACTAGAAGTTCTCGGCCACGGCAACGGCGGCACAGTCTACAAGGTCCGCGATAAGCGAACCTCATCGATCTACGCTCTCAAAGTCGTACAATCCAGCTCCGACGCCACAACGCGCCGCCGCATCAAGACAGAAACCGAGATCCACAGCCGCGCCGCCGACTCACCTTACGTCGTCCGCTACCATGGCTCCTTCGAGAGCCCGCTCTCCGGCGACGTCGCCATCCTAATGGAGTACATGGACTCTGGCACGCTGGAAACACTCTTGAAAACAAAAGGCACGTTCGATGAAGCCTCGCTGGCAAAGGTGGCGCGTGACGTTCTTAACGGTCTTAACTACCTCCACGCGCGCAATATCGTGCACCGTGACATAAAGCCCGCGAACCTACTCGTGAATAGCAAGAATGAGGTCAAGATCGGTGATTTTGGGGTGAGTAAGCTCATGTGCCGCACGCTCGACCCGTGCAAATCCTACGTCGGCACGTGCGCCTATATGAGCCCGGAGCGGTTCGACCCGGACGCATATGGCGGGAACTATAACGGATATGCAGCGGATATATGGAGCCTGGGCCTGACCCTTCTGGAGCTTTACATGGGTCACTTCCCATTACTCCAAGAGGGTCAGAGGCCAGATTGGGCTACCCTAATGTGGGCAATTTGTTTCGGGGAGCGGCCGAGTTTGCCTGGCGGCGTCTCGGCCGAGTTCCGCGACTTTGTTGAGTGTTGCCTAAAGAAGGAGTCTAGTGAAAGGTGGACGGCTCCTCAGCTCTTGACCCACCCGTTTCTTTGCAAGAATGACCCGGAAACTTAG 978 0.5716 MALVRHRRHLNLRLPLPEPSERCLRFPLPQPTTTAAKSFSTTAASSGDVIFPGDIEKLEVLGHGNGGTVYKVRDKRTSSIYALKVVQSSSDATTRRRIKTETEIHSRAADSPYVVRYHGSFESPLSGDVAILMEYMDSGTLETLLKTKGTFDEASLAKVARDVLNGLNYLHARNIVHRDIKPANLLVNSKNEVKIGDFGVSKLMCRTLDPCKSYVGTCAYMSPERFDPDAYGGNYNGYAADIWSLGLTLLELYMGHFPLLQEGQRPDWATLMWAICFGERPSLPGGVSAEFRDFVECCLKKESSERWTAPQLLTHPFLCKNDPET 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61692g00001 325 CDD PKc_MAPKK_plant_like 54 318 - -
Stsc61692g00001 325 Gene3D Transferase(Phosphotransferase) domain 1 139 325 - -
Stsc61692g00001 325 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Stsc61692g00001 325 ProSitePatterns Protein kinases ATP-binding region signature. 61 84 IPR017441 GO:0005524
Stsc61692g00001 325 SUPERFAMILY Protein kinase-like (PK-like) 52 322 IPR011009 -
Stsc61692g00001 325 ProSiteProfiles Protein kinase domain profile. 55 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61692g00001 325 FunFam Mitogen-activated protein kinase 2 138 325 - -
Stsc61692g00001 325 Gene3D Phosphorylase Kinase; domain 1 28 137 - -
Stsc61692g00001 325 Pfam Protein kinase domain 56 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61692g00001 325 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 42 321 - -
Stsc61692g00001 325 SMART serkin_6 55 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61692g00001 Stsc-Chr61692 1770 3141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61692g00001 1 318 MAP Kinase Kinase Gene Family AT1G73500 62.579 7.15e-129 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Stsc61692g00001 Pkinase 1.5e-63 CL0016