Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61673g00003 ATGGATTTCTGGCCAGAGTTTCTTGCATCAAGTTGGGGAAAAGAGTTTGTAGCAGGAGGGTTTGGAGGGATTGCTGGAATAGTATCTGGTTATCCATTAGACACCATAAGAATCAGGCAACAAAGCTCAAACATTTTTGGTTCATCATCATCATCATCAGCATTCAGTATTCTTAGAAATGCTATTGCTAAGGAAGGACCAGCTTCTCTTTACCGTGGCATGGGTGCACCTTTGGCCTCTGTTACATTTCAGAATGCTGCAGTTTTCCAAACTTATGCAGTTCTCTCAAGAGTTTTTGACAAATCAGTTTCTCCCAATGACCCTCCTTCCTACAAGAGTGTAGCATTAGGAGGAGTTGGCACAGGTGCTCTCCAGAGTATAATTCTTTCCCCTGTAGAACTGATTAAGATTCGTCTTCAACTGCGCCGTGGCGCAAACCACTTGACAGAACCTCAAAAGGGTCCTGTTATGGTTGCCAAGAACATATGGAGAAAGGAGGGACTCAAAGGAATCTACAGAGGACTAGGCATAACTGTGATAAGAGATGCACCTGCTCATGGTATCTATTTCTGGACATATGAATACATGAGAGAACAGCTTCACCCAGGATGTAGAAAAAGTGGGCAAGAAAGCTTGACAACTATGTTAACAGCAGGGGGGTTAGCTGGGGTAACAAGTTGGATTTCTTGCTACCCTTTTGATGTTGTGAAAACAAGGTTACAGGCACAAACACCAGATTCTTTGAAATACAATGGCATTGTTGATTGCATTAGAAAGAGTGTTAAGGAAGAAGGGCATGCTGTTCTATGGCGTGGACTAGGGACTGCAGTTGCTAGAGCTTTTGTAGTGAATGGTGCTGTGTTTGCAGCTTATGAGATAACACTAAGGCTGTTGTTTAGTAATGGAAATATTCAAATGCAGGAAACTATATAA 933 0.4234 MDFWPEFLASSWGKEFVAGGFGGIAGIVSGYPLDTIRIRQQSSNIFGSSSSSSAFSILRNAIAKEGPASLYRGMGAPLASVTFQNAAVFQTYAVLSRVFDKSVSPNDPPSYKSVALGGVGTGALQSIILSPVELIKIRLQLRRGANHLTEPQKGPVMVAKNIWRKEGLKGIYRGLGITVIRDAPAHGIYFWTYEYMREQLHPGCRKSGQESLTTMLTAGGLAGVTSWISCYPFDVVKTRLQAQTPDSLKYNGIVDCIRKSVKEEGHAVLWRGLGTAVARAFVVNGAVFAAYEITLRLLFSNGNIQMQETI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61673g00003 310 SUPERFAMILY Mitochondrial carrier 11 292 IPR023395 -
Stsc61673g00003 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 98 IPR018108 -
Stsc61673g00003 310 Gene3D Mitochondrial carrier domain 14 308 IPR023395 -
Stsc61673g00003 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 199 IPR018108 -
Stsc61673g00003 310 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 298 - -
Stsc61673g00003 310 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Stsc61673g00003 310 PRINTS Mitochondrial carrier protein signature 219 241 IPR002067 GO:0055085
Stsc61673g00003 310 PRINTS Mitochondrial carrier protein signature 172 190 IPR002067 GO:0055085
Stsc61673g00003 310 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Stsc61673g00003 310 FunFam Mitochondrial arginine transporter BAC2 11 308 - -
Stsc61673g00003 310 Pfam Mitochondrial carrier protein 211 301 IPR018108 -
Stsc61673g00003 310 Pfam Mitochondrial carrier protein 115 200 IPR018108 -
Stsc61673g00003 310 Pfam Mitochondrial carrier protein 11 101 IPR018108 -
Stsc61673g00003 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 297 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61673g00003 Stsc-Chr61673 10822 13370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61673g00003 1 301 Antiporters AT1G79900 69.767 1.15e-144 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61673g00003 K15109 - gmx:100812056 493.041