Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61665g00001 ATGGGGAAAAAAGGAGGCTGGTTTTCGTCGGTGAAGAAAGTTTTCAAGTCCTCATCATCGTCATCTTCTTCTTCTAAGAATTTGTTGCCGGCTCCGGCACAGGCGAAGAAGAAGGACAACAACACAGGGAAGAACCTGCAGCACCAAGTACCAGAAGCAGAAGTTGTGCCTTTTGAAAGGTTTCAAGCAGAGACTTCACAACATGTCACAATTGAGGACAGTGCCACGTCCTCAGCGCCAGTGGTTGAAGACAGGAATCATGCTATTGCGGTTGCGGCCGCAACCGCAGCCGCTGCCGAGGCTGCGGTGGTGGCTGCCCAGGCCGCCGCTAGAGTTGTGAGACTGGCGGGTTATGGGCGGCACTCCAAGGAAGAGAGAGCTGCAACACTCATTCAGTCATACTACAGGGGCTACCTGGCACGACGCGCTTTGCGTGCATTAAAGGGACTAGTGAGGTTGCAAGCGCTGGTGAGGGGACACAATGTGAGGAAGCAAGCGCAGATGACAATGCGGTGTATGCAAGCATTAGTAAGAGTGCAAGCAAGAGTCAGAGCTCGCAGGATTCAGCTCAATCACGAGAAGCATCATCATCATCATCAGAAGACGCTGGAAAAGCATCATCATCATGAAGATGATTATGACATTGATGATGATGATGATGAGCAAGTGCAAGTTCAGAAGCCAGTGCCCAATAACAGCAAGCCTACTATGATGAGCCCCATGAGAAGGTTAGATAATAATAATGGTTGGGACAATAGGCATCAGAGTATCCAAAAGGTTAGGGAAAATGATTTGAGGAAACAAGATGCAGCAATGAAGAGGGAGAGAGCTCTTGCTTATGCTTTCAACTCCCAGCAAGAGCAACCACAGAAACAATACATGCAAACAGCATCAAATAGTGATGATATGGGAACTTATTATCCCAATGAGCGTGAAAAAAACCAATGGGGTTGGAATTGGTTAGAGCGTTGGATGTCATCTCAACCTCACAATGTTAAGCACGTGGGCTCACGTGACACACGTGACACCCCTTACCTGAATCTTGCTTCAACAACCTCAACAGATAACATGTCTGAGAAAACTGTAGAAATGGACAAGGTTGCAACACCAGGTCCAAGCAGTAATATCAACATGGGCTTAACGAACCAAGACTTTGTTGATCAAAGCCCAGTTTCAAGTAGACAATATCAAAGACCTCCAAGCCCAAGTAGGCCCAGTTATATGTCACCAACTCAGTCTGCAAAAGCCAAGGTTCGGGATCAAGGCCCGATCAAGCCACGGGCCTCGCCTGGGCCACAGTGGAACTCATCGACAAAGGGGGTTTCTGTTACGGGCTCAGGCTGTGACTCGTCTAGCTCGGGTGGAACAACAAGTTACCAATATACAAGAAGCCCAAGCCCAAAGATTAATGGGTACCGTCCTCAATCTAGAAGGATAATTAATAGCAACCCAGATTCCATTGAAGACTGGGCCATTCAACTTGGAACCCATGGATGGACATAA 1503 0.479 MGKKGGWFSSVKKVFKSSSSSSSSSKNLLPAPAQAKKKDNNTGKNLQHQVPEAEVVPFERFQAETSQHVTIEDSATSSAPVVEDRNHAIAVAAATAAAAEAAVVAAQAAARVVRLAGYGRHSKEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRIQLNHEKHHHHHQKTLEKHHHHEDDYDIDDDDDEQVQVQKPVPNNSKPTMMSPMRRLDNNNGWDNRHQSIQKVRENDLRKQDAAMKRERALAYAFNSQQEQPQKQYMQTASNSDDMGTYYPNEREKNQWGWNWLERWMSSQPHNVKHVGSRDTRDTPYLNLASTTSTDNMSEKTVEMDKVATPGPSSNINMGLTNQDFVDQSPVSSRQYQRPPSPSRPSYMSPTQSAKAKVRDQGPIKPRASPGPQWNSSTKGVSVTGSGCDSSSSGGTTSYQYTRSPSPKINGYRPQSRRIINSNPDSIEDWAIQLGTHGWT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61665g00001 500 MobiDBLite consensus disorder prediction 16 49 - -
Stsc61665g00001 500 MobiDBLite consensus disorder prediction 430 475 - -
Stsc61665g00001 500 MobiDBLite consensus disorder prediction 191 250 - -
Stsc61665g00001 500 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Stsc61665g00001 500 SMART iq_5 146 167 IPR000048 GO:0005515
Stsc61665g00001 500 SMART iq_5 123 145 IPR000048 GO:0005515
Stsc61665g00001 500 MobiDBLite consensus disorder prediction 388 475 - -
Stsc61665g00001 500 MobiDBLite consensus disorder prediction 331 361 - -
Stsc61665g00001 500 PANTHER IQ-DOMAIN 5-RELATED 1 450 - -
Stsc61665g00001 500 ProSiteProfiles IQ motif profile. 148 175 IPR000048 GO:0005515
Stsc61665g00001 500 MobiDBLite consensus disorder prediction 343 358 - -
Stsc61665g00001 500 Pfam IQ calmodulin-binding motif 125 145 IPR000048 GO:0005515
Stsc61665g00001 500 Pfam IQ calmodulin-binding motif 151 166 IPR000048 GO:0005515
Stsc61665g00001 500 MobiDBLite consensus disorder prediction 388 416 - -
Stsc61665g00001 500 MobiDBLite consensus disorder prediction 16 30 - -
Stsc61665g00001 500 Gene3D - 121 174 - -
Stsc61665g00001 500 MobiDBLite consensus disorder prediction 225 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61665g00001 Stsc-Chr61665 5671 12230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61665g00001 1 499 IQD Protein Family AT3G49260 45.873 1.95e-91 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61665g00001 - - adu:107495204 629.017