Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61656g00003 ATGCAAGAGATTTTGAAAGGATACCGTAAAGAGTTTCGCAGACTCTGTGAATTCATAAGAAACCATTTGGCCAATCTTAATAAGTATCGTGATCAGCGTGACAGACTAGATCTTTCAGCTCCTGAGAGCTTGGAACTATATTTGGATACAAGATTTGAGCAGCTGAAAATTGCAACAGAACTTGGACTTTGGCAGGAAGCATTTAGATCTTTTGAAGACATACATGGATTGATGTGCTTGGTAAAAAAGACACCAAAACCATCTTTGATGGTTGTTCACTATGCTAAACTAACAGAAATATTTTGGATAGGCTCAAGTCATCTATATCGTGCAAATGCGTGGTTTAGGCTATTTTTATTGCAGAAGAGCTTCAACAAGAATTTGAGTCAGAAGGATTTGCAATTAATAGCTTCATCAGTTGTTCTGGTTGCACTTTTCATGCCTCCTCATGATCGTACTCATGGAACATCGCATTTGGAATTGGTGCATGAAAAGAAGAGAAATTCGAGGATCTCTAATCTTATTGGGTTTAATATGGAAACTAAACCTGAAAGCAGAGAAATGCTTTCAAGATCATCACTTCTTGCTAAACTAGCATCCGTGGGTGTGATGTCTTGTGTAACTCAGGAAGTGAAGGATATTTACAACATTTTGGAACATGAATTCCTTCCCTCAGATCTTGCAGTAAAAGTGCAACCATTGTTGATTAAGATATCGAAATTAGGTGGGCCTAACTCAACCCCAAAAGCTAGCTCATGGGGTGAAGGATACCTCACACTTATAAACACTCGAGAGTCTTCATCCTTCATAGATATGGGACTTGTAATACACCTCCGTCACGCCTAG 846 0.3889 MQEILKGYRKEFRRLCEFIRNHLANLNKYRDQRDRLDLSAPESLELYLDTRFEQLKIATELGLWQEAFRSFEDIHGLMCLVKKTPKPSLMVVHYAKLTEIFWIGSSHLYRANAWFRLFLLQKSFNKNLSQKDLQLIASSVVLVALFMPPHDRTHGTSHLELVHEKKRNSRISNLIGFNMETKPESREMLSRSSLLAKLASVGVMSCVTQEVKDIYNILEHEFLPSDLAVKVQPLLIKISKLGGPNSTPKASSWGEGYLTLINTRESSSFIDMGLVIHLRHA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61656g00003 281 FunFam Eukaryotic translation initiation factor 3 subunit A 85 159 - -
Stsc61656g00003 281 Gene3D - 86 263 - -
Stsc61656g00003 281 Gene3D UVR domain 34 85 - -
Stsc61656g00003 281 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 10 241 IPR027512 GO:0005852
Stsc61656g00003 281 FunFam Eukaryotic translation initiation factor 3 subunit A 33 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61656g00003 Stsc-Chr61656 8121 8983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61656g00003 3 243 Eukaryotic Initiation Factors Gene Family AT4G11420 72.428 4.28e-122 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61656g00003 K03254 - gmx:100803796 395.971