Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61653g00001 ATGAAGAAGTTAGAAGTGGAAGTAACCTCCAAGGAAATGATCAAACCTTCTTCTCCAACTCCAAACCACCTTCGATGTTATCAACTCTCTTTTCTTGATCAAATCTCTCCCATGGTTTACAACCCCGCCGTTCTCTTCTACTCTTTCAACCAAATCAATGCAACCACCACCACCACCATCTCCAACCTCCTCAAGAAATCTCTCTCCCTTGCCCTAGCCCATTTCTACCCTCTTGCCGGACGGATCGACAGCGGTAAGGGCTTTGTCGACTGTACCGATGGCGGCGTACCTTTTATAGAAACAAAAGTGAAGAATTGCAAACTTGCTGAAGTTATTCATAATCCAATTCCTGGAGAACTGAACCATCTAGTTCCATTCAAACTGAACAACATAACCAACATTGTATTCGGAGTACAGCTCAACGTTTTCGACTGCGGCGGCATTGCAATCGGCGCGTGTCTTTCACACCAAATCTACGACGCGTTGTCGTTCTTCAAGTTTCTTAATTCTTGGTCTTCCATTGCCGCCAAAAATGGAAACTTACCAAATCCAGAGTTTCTTTCATCAAAGCTTTTCCCTCCGATAAACACCTCGGGCTTCGATCCGAATGTCGGCATAATGACGGAGAATGTGGTGTGCAAGTTGTTCGTCTTCGACTCAAGAGTTATTGAAACCCTAAGGGAAAAATATGCAATGGAAAACAATAATGATGATGAATGTGAAGAGAAAAGACCAACTCGTGTTGAGGCTTTATCTGCATTCATTTGGAGCCGTTATGTGGCGGTTACGAGAGATCACAAAAGTTGTTATGAAAACAAGAAGAGGAGAATGCATGTTGTGATCCATGCTGTAAATCTAAGGCCAAAGATGGAACCGCGGTTGCCGGAAAATTCCTTTGGGAACTACTACCGAGTCTCCATGACCGTTCCATCTTTGGACTTGGAAGAGAAGTGTTATGGATTTGTGAAGCAGGTGAGGGATCAAATAAAGAAGATTGATAAAGAATACGTTAGAAAACTTCAAGAGGGTAAAGAGTATTTGAATTTCCTTAAGGATAGTTCAGAAAGGGTTCTTGTGAAGGGAGAATTGGTTTCATTCAGCTTCACAAGTCTATGTAGGTTTCCTCTCTATGATGCTGATTTTGGTTGGGGCAAACCAACATGGGTAGGTTTACCTGCCTTAACTTTTAAGAATCTTGTTGTGTTTTCTGACACTAAGATTGGTGGTGCCATTGAAGCCTATGTTAGCTTGAGCATGGAAGATATGGCAAAATTTGAAGCAGATAAGGAGTTACTTACTTGTGTTAACAACGATAATAATAAGCCATAG 1329 0.4199 MKKLEVEVTSKEMIKPSSPTPNHLRCYQLSFLDQISPMVYNPAVLFYSFNQINATTTTTISNLLKKSLSLALAHFYPLAGRIDSGKGFVDCTDGGVPFIETKVKNCKLAEVIHNPIPGELNHLVPFKLNNITNIVFGVQLNVFDCGGIAIGACLSHQIYDALSFFKFLNSWSSIAAKNGNLPNPEFLSSKLFPPINTSGFDPNVGIMTENVVCKLFVFDSRVIETLREKYAMENNNDDECEEKRPTRVEALSAFIWSRYVAVTRDHKSCYENKKRRMHVVIHAVNLRPKMEPRLPENSFGNYYRVSMTVPSLDLEEKCYGFVKQVRDQIKKIDKEYVRKLQEGKEYLNFLKDSSERVLVKGELVSFSFTSLCRFPLYDADFGWGKPTWVGLPALTFKNLVVFSDTKIGGAIEAYVSLSMEDMAKFEADKELLTCVNNDNNKP 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61653g00001 442 Pfam Transferase family 5 431 - -
Stsc61653g00001 442 PANTHER F21J9.9 7 433 - -
Stsc61653g00001 442 Coils Coil 322 342 - -
Stsc61653g00001 442 Gene3D - 208 436 IPR023213 -
Stsc61653g00001 442 Gene3D - 3 199 IPR023213 -
Stsc61653g00001 442 Coils Coil 223 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61653g00001 Stsc-Chr61653 2548 5769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61653g00001 4 426 Monolignol Biosynthesis Gene Families AT5G48930 24.454 2.15e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61653g00001 K13065 - gmx:102670206 583.563