Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61649g00005 ATGGCGTCGTCGAAGATTGTCACGACGAATACGGATCTGCCACGCGACTCTTCTTCTTCTTCTTCACCATTATCTTCTGCTGCTGCTACTTCTTCTTCTTCTTCCTCTTATTTCCTTCTTCATGATCAAAATCTGCATTATTATTCAAGCTCTTCCATGGTTATGGACGACCTTCTAAACTCCATCTACACCACCGCAACAACAACCACCTCTCATCCCTCAAACCCTTCTTCATCCCCTCCTCCTCCGCCCAAAACCGTCGACGATGTCTGGAAAGACATGATCCTAACCCACTCTCACAGAGACTCACCTCATCATCATAATCACCACCCGTTCGAGGAAATGACGCTTGAGGCTTTCCTCTCCAAGAACGGTGCCGTCACTGATGACGACCTCACCGCTGTTCCTTCTCTTCATAATCATCATCCTGTTGCTCATCAGTTCCCGCCGGTGCCCGCCGTTGAAGGCTCGTCCTCCTCCGCGGCTGAGCCTTTTGCAAATGGGATTGATGCTGCGGTGGCTGCTGGAGTCCCAGCACCCTCATCATCATCAGGAGGAGGAGGAGGTGGAGGTGGAGGAGGAGGAGGAGGAGGAGCAGCTGCGGTGGCAAAGGGAAAGAGAAGGGCGGTGGAGGAACCAGTGGATAAGGCCACTCTTCAGAAGCAGAGACGCATGATCAAGAATCGTGAGTCTGCAGCTAGGTCCAGGGAACGCAAGCAGGCTTACACAACTGACCTTGAGTCTAATGTTCAACAACTGGAGATAGAGAATGCCCGCTTATTGAGTGAAGAGGTGCCCCTTATTATATATATTTTATTACATATTATTGCTTGA 834 0.5024 MASSKIVTTNTDLPRDSSSSSSPLSSAAATSSSSSSYFLLHDQNLHYYSSSSMVMDDLLNSIYTTATTTTSHPSNPSSSPPPPPKTVDDVWKDMILTHSHRDSPHHHNHHPFEEMTLEAFLSKNGAVTDDDLTAVPSLHNHHPVAHQFPPVPAVEGSSSSAAEPFANGIDAAVAAGVPAPSSSSGGGGGGGGGGGGGGAAAVAKGKRRAVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTTDLESNVQQLEIENARLLSEEVPLIIYILLHIIA 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61649g00005 277 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 48 263 IPR043452 GO:0003700|GO:0045893
Stsc61649g00005 277 MobiDBLite consensus disorder prediction 205 243 - -
Stsc61649g00005 277 MobiDBLite consensus disorder prediction 67 87 - -
Stsc61649g00005 277 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 218 263 IPR004827 GO:0003700|GO:0006355
Stsc61649g00005 277 MobiDBLite consensus disorder prediction 1 32 - -
Stsc61649g00005 277 SUPERFAMILY Leucine zipper domain 220 263 IPR046347 GO:0003700|GO:0006355
Stsc61649g00005 277 Coils Coil 243 263 - -
Stsc61649g00005 277 SMART brlzneu 216 274 IPR004827 GO:0003700|GO:0006355
Stsc61649g00005 277 Pfam bZIP transcription factor 217 263 IPR004827 GO:0003700|GO:0006355
Stsc61649g00005 277 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 219 269 - -
Stsc61649g00005 277 Gene3D - 219 267 - -
Stsc61649g00005 277 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 223 238 IPR004827 GO:0003700|GO:0006355
Stsc61649g00005 277 MobiDBLite consensus disorder prediction 177 244 - -
Stsc61649g00005 277 CDD bZIP_plant_BZIP46 220 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61649g00005 Stsc-Chr61649 4348 5906 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61649g00005 85 265 bZIP Transcription Factor Family AT5G44080 39.594 1.05e-22 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc61649g00005 bZIP_1 2.5e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61649g00005 K14432 - gmx:100101890 145.206