Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61649g00004 ATGGCGTCGTCGAAGATTGTCACGACGAATACGGATCTGCCACGCGACTCTTCTTCTTCTTCTTCACCATTATCTTCTGCTGCTGCTACTTCTTCTTCTTCTTCCTCTTATTTCCTTCTTCATGATCAAAATCTGCATTATTATTCAAGCTCTTCCATGGTTATGGACGACCTTCTAAACTCCATCTACACCACCGCAACAACAACCACCTCTCATCCCTCAAACCCTTCTTCATCCCCTCCTCCTCCGCCCAAAACCGTCGACGATGTCTGGAAAGACATGATCCTAACCCACTCTCACAGAGACTCACCTCATCATCATAATCACCACCCGTTCGAGGAAATGACGCTTGAGGCTTTCCTCTCCAAGAACGGTGCCGTCACTGATGACGACCTCACCGCTGTTCCTTCTCTTCATAATCATCATCCTGTTGCTCATCAGTTCCCGCCGGTGCCCGCCGTTGAAGGCTCGTCCTCCTCCGCGGCTGAGCCTTTTGCAAATGGGATTGATGCTGCGGTGGCTGCTGGAGTCCCAGCACCCTCATCATCATCAGGAGGAGGAGGAGGTGGAGGTGGAGGAGGAGGAGGAGGAGGAGCAGCTGCGGTGGCAAAGGGAAAGAGAAGGGCGGTGGAGGAACCAGTGGATAAGGCCACTCTTCAGAAGCAGAGACGCATGATCAAGAATCGTGAGTCTGCAGCTAGGTCCAGGGAACGCAAGCAGGTACCGTACTACCCCCTTTTTTTCAATTATTTCTTGATAAAGTTTCATTCTTTTTATTTTTATTTGATGTTTGGAAAATGGGGATTCTTATGTGGTAAGTGA 822 0.4964 MASSKIVTTNTDLPRDSSSSSSPLSSAAATSSSSSSYFLLHDQNLHYYSSSSMVMDDLLNSIYTTATTTTSHPSNPSSSPPPPPKTVDDVWKDMILTHSHRDSPHHHNHHPFEEMTLEAFLSKNGAVTDDDLTAVPSLHNHHPVAHQFPPVPAVEGSSSSAAEPFANGIDAAVAAGVPAPSSSSGGGGGGGGGGGGGGAAAVAKGKRRAVEEPVDKATLQKQRRMIKNRESAARSRERKQVPYYPLFFNYFLIKFHSFYFYLMFGKWGFLCGK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61649g00004 273 SUPERFAMILY Leucine zipper domain 221 246 IPR046347 GO:0003700|GO:0006355
Stsc61649g00004 273 MobiDBLite consensus disorder prediction 177 215 - -
Stsc61649g00004 273 MobiDBLite consensus disorder prediction 67 87 - -
Stsc61649g00004 273 MobiDBLite consensus disorder prediction 1 32 - -
Stsc61649g00004 273 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 48 241 IPR043452 GO:0003700|GO:0045893
Stsc61649g00004 273 Gene3D - 219 243 - -
Stsc61649g00004 273 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 223 238 IPR004827 GO:0003700|GO:0006355
Stsc61649g00004 273 Pfam bZIP transcription factor 217 240 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61649g00004 Stsc-Chr61649 4348 5906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61649g00004 85 240 bZIP Transcription Factor Family AT5G44080 38.372 1.82e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc61649g00004 bZIP_1 2e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61649g00004 K14432 - gmx:100101890 118.242