Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61649g00003 ATGGCGTCGTCGAAGATTGTCACGACGAATACGGATCTGCCACGCGACTCTTCTTCTTCTTCTTCACCATTATCTTCTGCTGCTGCTACTTCTTCTTCTTCTTCCTCTTATTTCCTTCTTCATGATCAAAATCTGCATTATTATTCAAGCTCTTCCATGGTTATGGACGACCTTCTAAACTCCATCTACACCACCGCAACAACAACCACCTCTCATCCCTCAAACCCTTCTTCATCCCCTCCTCCTCCGCCCAAAACCGTCGACGATGTCTGGAAAGACATGATCCTAACCCACTCTCACAGAGACTCACCTCATCATCATAATCACCACCCGTTCGAGGAAATGACGCTTGAGGCTTTCCTCTCCAAGAACGGTGCCGTCACTGATGACGACCTCACCGCTGTTCCTTCTCTTCATAATCATCATCCTGTTGCTCATCAGTTCCCGCCGGTGCCCGCCGTTGAAGGCTCGTCCTCCTCCGCGGCTGAGCCTTTTGCAAATGGGATTGATGCTGCGGTGGCTGCTGGAGTCCCAGCACCCTCATCATCATCAGGAGGAGGAGGAGGTGGAGGTGGAGGAGGAGGAGGAGGAGGAGCAGCTGCGGTGGCAAAGGGAAAGAGAAGGGCGGTGGAGGAACCAGTGGATAAGGCCACTCTTCAGAAGCAGAGACGCATGATCAAGAATCGTGAGTCTGCAGCTAGGTCCAGGGAACGCAAGCAGGCTTACACAACTGACCTTGAGTCTAATGTTCAACAACTGGAGATAGAGAATGCCCGCTTATTGAGTGAAGAGGCTGAAAAGAAAAAGAAGAGGTTGAAGGAGCTTCTTGAGTTTGTCATTCCAGTTGTGGAGAAGCGTAAACCAAAAAGGCTTCTAAGAACAAATTCAGTTCAGTCACTGTGA 903 0.5017 MASSKIVTTNTDLPRDSSSSSSPLSSAAATSSSSSSYFLLHDQNLHYYSSSSMVMDDLLNSIYTTATTTTSHPSNPSSSPPPPPKTVDDVWKDMILTHSHRDSPHHHNHHPFEEMTLEAFLSKNGAVTDDDLTAVPSLHNHHPVAHQFPPVPAVEGSSSSAAEPFANGIDAAVAAGVPAPSSSSGGGGGGGGGGGGGGAAAVAKGKRRAVEEPVDKATLQKQRRMIKNRESAARSRERKQAYTTDLESNVQQLEIENARLLSEEAEKKKKRLKELLEFVIPVVEKRKPKRLLRTNSVQSL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61649g00003 300 MobiDBLite consensus disorder prediction 67 87 - -
Stsc61649g00003 300 MobiDBLite consensus disorder prediction 205 243 - -
Stsc61649g00003 300 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 218 263 IPR004827 GO:0003700|GO:0006355
Stsc61649g00003 300 MobiDBLite consensus disorder prediction 1 34 - -
Stsc61649g00003 300 Gene3D - 219 277 - -
Stsc61649g00003 300 SMART brlzneu 216 278 IPR004827 GO:0003700|GO:0006355
Stsc61649g00003 300 Pfam bZIP transcription factor 217 275 IPR004827 GO:0003700|GO:0006355
Stsc61649g00003 300 SUPERFAMILY Leucine zipper domain 220 268 IPR046347 GO:0003700|GO:0006355
Stsc61649g00003 300 Coils Coil 243 275 - -
Stsc61649g00003 300 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 223 238 IPR004827 GO:0003700|GO:0006355
Stsc61649g00003 300 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 48 272 IPR043452 GO:0003700|GO:0045893
Stsc61649g00003 300 MobiDBLite consensus disorder prediction 177 246 - -
Stsc61649g00003 300 CDD bZIP_plant_BZIP46 220 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61649g00003 Stsc-Chr61649 4348 8070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61649g00003 85 293 bZIP Transcription Factor Family AT5G44080 40.969 4.82e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc61649g00003 bZIP_1 3.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61649g00003 K14432 - gmx:100101890 164.851