Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61648g00003 ATGTGTGATCCAAGTGGAATTGCTCAATTCATAAAGGGCATTGCAGAAATAGCCCAAGGTTCATCAAAGCCTTCCGTCATGCCAGTGTGGTGTAGGGAGCTTCTTTGTGCCAGGGACCCACCAACAGTCACATGCCTCCACCCTGAATACGACCAACCACCGCTTGATGACAACAAAAACGTCTTCTCCAAACCCTGCCAAGCTTCCTTCTTCTTTGGCCCCAAACAGATCCATGCGTTGCGCCGCCTCCTCCCTCTTCACCTTGCTCAATCTTCCTCCACGTTCGATGTCCTCACTGCATTCCTCTGGCGTTCTCATACAGCTGCACTGCATTATCAAAACCCTAATGAAGAGGTTCGCTTGATGTACGTAGTCAATGCACGTTTTGAACCTTGCAGATCTACGTTTAATCCTCCACTACCTGAAGGCTATTATGGCAACGCTTTTGTGTGTCCTGTGGTAGTTTCCACTGTGGGAATGCTATGCGGACGGCCGTTGAGCTACGCGTTGGAGTTGGTGAAGAAATCAAAGAAAGCAGCTACTGAGGAGTATGTGCGCTCTACTGCGGATCTAATGGCCATGAATGGAAGGCCTGCCGGTTCGTTGAGAAGATCCTTTGTAGTTTCAGACCTGACAAAATCTGGGTTAAGTGATGTGGATTATGGATGGGGTAAGCCTTTGTATTCCGGAATAGATGGTATATATGATATTCCTGGTGCATGCTACTATTTTCCACATACTAATTCTAAAGGAGAGAATGGTAAAGTGGTCTTAATTTGCCTCCTAGAAGAAGCCATGAAAAGGTTTGAGAAAGAGCTTAATGGAATACTTCACATCAAGGATGAAGATGAACCTATCAAGTATCTGTCCAATCTGTAG 879 0.4608 MCDPSGIAQFIKGIAEIAQGSSKPSVMPVWCRELLCARDPPTVTCLHPEYDQPPLDDNKNVFSKPCQASFFFGPKQIHALRRLLPLHLAQSSSTFDVLTAFLWRSHTAALHYQNPNEEVRLMYVVNARFEPCRSTFNPPLPEGYYGNAFVCPVVVSTVGMLCGRPLSYALELVKKSKKAATEEYVRSTADLMAMNGRPAGSLRRSFVVSDLTKSGLSDVDYGWGKPLYSGIDGIYDIPGACYYFPHTNSKGENGKVVLICLLEEAMKRFEKELNGILHIKDEDEPIKYLSNL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61648g00003 292 PANTHER ACYL TRANSFERASE 4 1 275 - -
Stsc61648g00003 292 Gene3D - 1 51 IPR023213 -
Stsc61648g00003 292 Pfam Transferase family 1 272 - -
Stsc61648g00003 292 Gene3D - 52 273 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61648g00003 Stsc-Chr61648 7400 8364 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61648g00003 9 273 Monolignol Biosynthesis Gene Families AT5G48930 28.214 1.59e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61648g00003 K19861 - gmx:100795237 344.739