Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61648g00002 ATGTTGGATTATTTTAGCCTTGATTTCAAATATGTAGCTACAGCAGTTCTAGCCTTAGTTATAGCAGTGGTAGTTGCCCGAAGACATGGCCGGAGAAGAAAGCGCCACCCCGTTGCCGGAACTGTTTTCCACCAACTACTCAACTTCAACAGGCTACATGATTACATGACAGATCTTGCAAGAGAGAACAGCAGTTATAGGCTGCTTAGCTTATTAAGCAGTGAGGTGTACACTTCAGACCCCACCAATGTGGAATATATCCTCAAGACTAACTTTTCAAACTATGGCAAGGGACAGTATCAATATGAAATTCTGAAGGACCTGTTGGGAGATGGGATATTCACAGTGGATGGAGAGAAGTGGAGACATCAGAGAAAGGCAGCTAGCTATCAATTTTCCACAAAGCTTTTGAGAGATTACAGCAGTTCGGTTTTCAAATCCAATGCTGTAAAGCTTGCAGCAATAGTGTCTGAAGCAGCAATCTCAAATCAGGCAATTGAAATCCAAGACTTACTTTTCAAATCAACCATGGACTCAGTATTTAAAATAGTACTAGGTGTGGAGCTGGACACCATGGGTGGAACATATGAAGAAGGCACCAAATTCTCCAGTTCTTTTGATGATGCAAGTGCAATTACTATACTTAGGTATATTGACATTTTCTGGAAAGCAAAGCGGTTTTTGAACATAGGACAAGAAGCATTACTGAAGAAACATGTCAGAGTTGTGGATGAATTTGTGTACAATGTGATTAAAACCAAGACTGAACAAGTCCATAATCAAGATGATAAGTCTGTGAGGAAGGACCTTTTGTCAAGGTTTATAGAATTGGATGAGACTGATCCGAAGTACCTGAAAGACATCATCTTGAGTTTCATCATAGCTGGAAAAGATACAACAGCCACTACTCTCTCATGGTTCCTTTATAGGCTATGCAAGGTTCCTCATGTGCAGGAAAAGATTGCACAAGAAGTCAAAGATGCAACAGGGTTATCAGATTTGTCAAAGCCTGAGGAGATTGCAGCTAATATAACTGAAGAAGCTCTTGAAAAAATGCAGTATCTACATGCAGCTTTGACAGAGACACTAAGACTCTACCCTGCTGTTCCATGGGATGCTAAGATTTGTTTCTCAGATGATGTGTGGCCAGATGGATTCCATGTCAAGAAAGGTGATCTTGTGGCATACCAACCTTATGCCATGGGAAGGATGAAATCATTGTGGGGTGGTGATGCTGAAGAGTTCAAACCAGAAAGGTGGCTTCACATAGATGGAAATTTTCAGCAGGAAAGCCCTTTCAAATTCACAGCTTTCCAGGCGGGTCCAAGACTTTGTCTTGGGAAGGATTTCTCATACAGACAGATGAAAATCTTCAGTGCTATCCTGTTAGGAAGCTACAAATTCAAGTTGGTTGATGAACACAAATCAGTACATTACAGAACTTCACTTACTCTGCATCTGGATGGAGGTCTGCATCTGAATGCTTATAGAAGATTTGGATATTCGAATTCATAG 1515 0.4086 MLDYFSLDFKYVATAVLALVIAVVVARRHGRRRKRHPVAGTVFHQLLNFNRLHDYMTDLARENSSYRLLSLLSSEVYTSDPTNVEYILKTNFSNYGKGQYQYEILKDLLGDGIFTVDGEKWRHQRKAASYQFSTKLLRDYSSSVFKSNAVKLAAIVSEAAISNQAIEIQDLLFKSTMDSVFKIVLGVELDTMGGTYEEGTKFSSSFDDASAITILRYIDIFWKAKRFLNIGQEALLKKHVRVVDEFVYNVIKTKTEQVHNQDDKSVRKDLLSRFIELDETDPKYLKDIILSFIIAGKDTTATTLSWFLYRLCKVPHVQEKIAQEVKDATGLSDLSKPEEIAANITEEALEKMQYLHAALTETLRLYPAVPWDAKICFSDDVWPDGFHVKKGDLVAYQPYAMGRMKSLWGGDAEEFKPERWLHIDGNFQQESPFKFTAFQAGPRLCLGKDFSYRQMKIFSAILLGSYKFKLVDEHKSVHYRTSLTLHLDGGLHLNAYRRFGYSNS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61648g00002 504 CDD CYP86A 76 491 - -
Stsc61648g00002 504 SUPERFAMILY Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61648g00002 504 PANTHER CYTOCHROME P450 24 491 - -
Stsc61648g00002 504 Pfam Cytochrome P450 35 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61648g00002 504 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61648g00002 504 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61648g00002 504 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61648g00002 504 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61648g00002 504 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61648g00002 504 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61648g00002 504 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61648g00002 504 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61648g00002 504 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61648g00002 504 Gene3D Cytochrome P450 22 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61648g00002 Stsc-Chr61648 2524 5146 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61648g00002 16 498 Cytochrome P450 AT2G45510 53.862 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61648g00002 - - mof:131144671 664.84