Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61648g00001 ATGACAGGGAAGGACCCTGTCCGTGTCGTCAGAGAAGCATTGTCCAAAGCACTTGTATTGTATTATCCATTAGCTGGGAGGCTTAGGGAAGCTCCTACTGGCAAACTTATGGTGGATTGCACTGCCCAAGGTGTATCGTTCATCGAAGCTGATGCAGATGTTACACTTAACCACTTTGGTGTTGATCTTCTGCCTCCCTTCCCTTGCTTTCATGAGCTTCTCTATCATGTTCCATCCTCTGACGATGGAATTATTAACTCTCCCCTCCTGCTTATTCAGGTGACACGGCTCAAATGCGGTGGCTTTATATTTGCTATCCGTGTGAATCACGCAATCTGTGATGGAATTGGAATTGCTCAATTCATAAAGGGCATTGCAGAAATAGCCAAAGGTGCATCAAAGCCTTCCATCACCCCTGTGTGGTGTAGGGACCTTCTTTATGCCAGAGACCCACCAACAGTTACATGCCTCCACCCTGAATACCAACAACTACCACTTCATGACAACAAAACTCCCTCCTTCAAATGCTGCCATGCTTCCTTCTTCTTTGGCCCCAAACACATCCATGCATTGCGCCGCCTCCTCCCTCTTCACCTTGCTCAATCTTCCTCCACCTTCGATATCCTCACTGCATTCCTGTGGCGTTGTCATACAGCTGCAATTCATTGGCAAAACCCTAATCAAGAGGTTCGCTTGATGTGCGTAGTTAACGCACGTTTTGAACCTTGCAGATCTACGTTTAATACTCCACTACCTGAAGGCTATTATGGAAACGCTTTTGTGATTCCTGCGGTAGCTTCCACTGTGGGGATGCTATGCGGGCGGCCGTTGAGCTACGCGTTGGAGTTGGTGAAGAAATCAAAGAAAGAAGCTACTGAGGAGTTTGTCCACTCTACTGCCGATCTAATGGCAACTAATGGAAGGCCTGTGTTTTCCATGGAAGGATCCTTGATAGTTTCAGACCTGACAAAATCTGGGTTAAGTGATGTGGATTATGGATGGGGTAAGCCTTTGTTTTCCGGACTAGATGGTCTAGATGATTTTCCTGGTGCGTGCTGCTATGTTCCATATACTAACTCTAAAGGAGAACATGGGAAAGTGGTCTTAATTTGCCTCCTAGAAGAAGCCATGGAAAGGTTTGAGAAAGAGCTTAATGGAATACTTCATGTCAAGGATGAAGATGAACCTATCAATGCAAGTAATTAA 1206 0.4577 MTGKDPVRVVREALSKALVLYYPLAGRLREAPTGKLMVDCTAQGVSFIEADADVTLNHFGVDLLPPFPCFHELLYHVPSSDDGIINSPLLLIQVTRLKCGGFIFAIRVNHAICDGIGIAQFIKGIAEIAKGASKPSITPVWCRDLLYARDPPTVTCLHPEYQQLPLHDNKTPSFKCCHASFFFGPKHIHALRRLLPLHLAQSSSTFDILTAFLWRCHTAAIHWQNPNQEVRLMCVVNARFEPCRSTFNTPLPEGYYGNAFVIPAVASTVGMLCGRPLSYALELVKKSKKEATEEFVHSTADLMATNGRPVFSMEGSLIVSDLTKSGLSDVDYGWGKPLFSGLDGLDDFPGACCYVPYTNSKGEHGKVVLICLLEEAMERFEKELNGILHVKDEDEPINASN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61648g00001 401 Gene3D - 161 384 IPR023213 -
Stsc61648g00001 401 PANTHER ACYL TRANSFERASE 4 6 386 - -
Stsc61648g00001 401 Gene3D - 2 160 IPR023213 -
Stsc61648g00001 401 Pfam Transferase family 8 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61648g00001 Stsc-Chr61648 275 1935 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61648g00001 5 384 Monolignol Biosynthesis Gene Families AT5G48930 30.280 2.55e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61648g00001 K19861 K13610 gmx:100795237 521.161