Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61647g00004 ATGGATGCTATTAATTACTCGATCGTTTCTAAATCTTCTTCTGAAACAGATTCGATAATCCAGTTTTTAGGTGACGTCGATGAGGAGTATATTCCAAAGGCTGGAATGACTTTTCCAACACTTGAAGAAGCAGCTGCTTTCTATAAAGAGTATGCTAAACGTGTTGGATTTTCTACTAAGATAAGGAACACGAATAGGTGCAAGGAGACCAAGGAAATAAAGAATCAACTCATTACATGTAACAGAGAGGAGAAATGGATTTCTGAGATGCCGTATGTTGAGAAGACGAATCCTACGTATGGTGCAAACTGTCCTGCAATGATTTATGTGCATGTAGTGAAGAAAAACCAGATGTTGGTGTATTTCAAAGGTTGTTCTTCATCATTCACATCCATGTTGCCCTGCTCAATCTCAGATGTTACTTCTATAGAATGA 435 0.3793 MDAINYSIVSKSSSETDSIIQFLGDVDEEYIPKAGMTFPTLEEAAAFYKEYAKRVGFSTKIRNTNRCKETKEIKNQLITCNREEKWISEMPYVEKTNPTYGANCPAMIYVHVVKKNQMLVYFKGCSSSFTSMLPCSISDVTSIE 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61647g00004 144 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 23 120 - -
Stsc61647g00004 144 Pfam FAR1 DNA-binding domain 47 120 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61647g00004 Stsc-Chr61647 14151 14957 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc61647g00004 FAR1 8.9e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61647g00004 - K17604 aip:110271906 119.012