Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61642g00002 ATGGCAGTAAAAAGTAGTGACTTGAAGCTTTTGGGTGGATGGTTCAGTCCAGTTGCCACAAGGGTGAAGATTGCTCTTAACATCAAAGGATTGGAATATGAGAACATTGAAGAAGACTTGGAATCCAAAAGTGACCTTCTTCTTCGTTCAAATCCTGTGTACAAGAAGATCCCAGTTCTAATTCATGGTGGGAAACCCATATGTGAATCCTCAATCATAGTTCAATATATTGATGAGGTTTGGTCCAATAATGGTCCTTCTATCCTTCCGCAACATACTTATGACAGAGCAGTTGCTAGATTCTGGGCTTCATGCATTGATGACAAGTTATTTGCTTGCATGAGGAACATTCTATCGGGTGGTGAAGATGAAGAGGAGAAGAAGCCACACTTTGAGCAATTGGAAGAAGAAGTGTTTGTGAAGTTGGAAGAGGCATTCAACAAATGCAGTGATGGAAAGCTCTTTTTTGGAGGCAACAACGTTGGATTTCTTGACATTATCTTTGGAAGCCTATTGCCTTTTATACGTGTTATAGAAGAGATTAATGAAAAGAAGATCCTCGTCGATGAAAAGTTTCCAAAATTAGCTAATTGGGCTGTGCATTTTGCTGCGAATTCAGCTGTGACTGGAACTCTTCCTGAGATTGACAAACTTGTGTTGTATACCAAGCCTCTTGCCCAAAAATGGGCTGCTGCTAAAGCTGCTGCCAAGTAA 714 0.4062 MAVKSSDLKLLGGWFSPVATRVKIALNIKGLEYENIEEDLESKSDLLLRSNPVYKKIPVLIHGGKPICESSIIVQYIDEVWSNNGPSILPQHTYDRAVARFWASCIDDKLFACMRNILSGGEDEEEKKPHFEQLEEEVFVKLEEAFNKCSDGKLFFGGNNVGFLDIIFGSLLPFIRVIEEINEKKILVDEKFPKLANWAVHFAANSAVTGTLPEIDKLVLYTKPLAQKWAAAKAAAK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61642g00002 237 CDD GST_N_Tau 8 81 - -
Stsc61642g00002 237 Gene3D Glutaredoxin 1 88 - -
Stsc61642g00002 237 FunFam Glutathione S-transferase U9 89 232 - -
Stsc61642g00002 237 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 217 IPR045073 -
Stsc61642g00002 237 FunFam Glutathione S-transferase GSTU6 3 88 - -
Stsc61642g00002 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc61642g00002 237 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Stsc61642g00002 237 SUPERFAMILY Thioredoxin-like 7 111 IPR036249 -
Stsc61642g00002 237 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 225 IPR010987 -
Stsc61642g00002 237 SFLD Main.3: Omega- and Tau-like 4 234 IPR045073 -
Stsc61642g00002 237 CDD GST_C_Tau 94 223 IPR045074 GO:0004364|GO:0006749
Stsc61642g00002 237 SFLD Glutathione Transferase (cytosolic) 4 234 IPR040079 -
Stsc61642g00002 237 SUPERFAMILY GST C-terminal domain-like 79 228 IPR036282 -
Stsc61642g00002 237 Pfam Glutathione S-transferase, C-terminal domain 114 204 IPR004046 -
Stsc61642g00002 237 Gene3D - 89 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61642g00002 Stsc-Chr61642 12665 14449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61642g00002 3 228 Glutathione S-transferase Gene Family AT1G10360 50.442 1.34e-75 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61642g00002 K00799 - gmx:547576 265.774