Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61623g00001 ATGCCGTCGAACTCGGATCTGGACCAGCAGATAGAGCAGCTGATGGAGTGCAAGCCGCTGGGGGAGGCGGAGGTGAAGGCTCTATGCGATCAAGCGAGGGCGATTCTTGTCGAGGAGTGGAACGTGCAGCCGGTGAAGTGTCCCGTCACGGTTTGCGGTGACATCCATGGCCAGTTCTACGATCTCATCGAGCTGTTCCGGATAGGAGGCAGCGCTCCTGACACTAATTATCTCTTCATGGGCGATTATGTAGATCGTGGGTACTATTCAGTGGAGACAGTTACACTTTTGGTGATATTAAAAGTCCGTTATAGAGATAGAATTACAATTCTTAGGGGAAATCATGAAAGCCGTCAAATTACTCAAGTGTATGGCTTCTACGATGAATGCTTGAGAAAATATGGGAATGCCAATGTCTGGAAGTACTTCACCGACCTGTTTGATTATTTACCACTAACTGCCCTCATTGAGAGTCAGATTTTCTGCTTGCATGGAGGGCTGTCACCTTCTTTGGATACACTGGATAATATCCGTGCGTTGGACCGTATACAGGAGGTTCCACATGAAGGGCCAATGTGTGACCTCTTGTGGTCTGATCCAGATGATCGCTGTGGTTGGGGAATATCTCCACGTGGTGCTGGATATACATTTGGCCAGGATATCGCTGCTCAGTTCAATCATACCAACGGTCTCTCCCTCATATCTAGGGCTCATCAGCTTGTCATGGAAGGGTACAATTGGTGCCAGGACAAGAATGTTGTAACAGTTTTTAGCGCTCCAAATTACTGTTACCGATGTGGGAATATGGCAGCCATCCTGGAAATCGGAGAGAACATGGATCAGAACTTTCTGCAGTTTGATCCAGCTCCCAGGCAAATTGAGCCTGACACTACGCGGAAGACTCCGGACTATTTTTTGTAA 921 0.4788 MPSNSDLDQQIEQLMECKPLGEAEVKALCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSAPDTNYLFMGDYVDRGYYSVETVTLLVILKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61623g00001 306 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
Stsc61623g00001 306 Gene3D - 2 306 IPR029052 -
Stsc61623g00001 306 SUPERFAMILY Metallo-dependent phosphatases 5 293 IPR029052 -
Stsc61623g00001 306 CDD MPP_PP2A_PP4_PP6 6 290 - -
Stsc61623g00001 306 SMART pp2a_7 20 290 IPR006186 GO:0016787
Stsc61623g00001 306 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 5 306 IPR047129 GO:0004722
Stsc61623g00001 306 PRINTS Serine/threonine phosphatase family signature 230 250 IPR006186 GO:0016787
Stsc61623g00001 306 PRINTS Serine/threonine phosphatase family signature 174 201 IPR006186 GO:0016787
Stsc61623g00001 306 PRINTS Serine/threonine phosphatase family signature 252 268 IPR006186 GO:0016787
Stsc61623g00001 306 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Stsc61623g00001 306 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Stsc61623g00001 306 PRINTS Serine/threonine phosphatase family signature 145 171 IPR006186 GO:0016787
Stsc61623g00001 306 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Stsc61623g00001 306 Pfam Calcineurin-like phosphoesterase 48 239 IPR004843 GO:0016787
Stsc61623g00001 306 FunFam Serine/threonine-protein phosphatase 1 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61623g00001 Stsc-Chr61623 1841 5826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61623g00001 49 225 Calmodulin-binding Proteins AT5G63870 36.449 4.37e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61623g00001 K04382 - gmx:100783950 631.713