Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61584g00001 ATGGATGCACGTAGCTACTCTTCCGATTCGGAATCTGCTACTGCAACAGAATCGATCATGCATTTTGGCCATGACGTTGATGAGGAGTATATTCAAAAGGCTGGAATGACTTTTCCATCACTTGAAGTAGCTGCTGCTTTCTACAAAGAGTATGCTAAACGTGCTGGATTTTCTACTAAAATGAGAAACACCAATAGGTGTAGGGAAACCAAGGAAATAAAGAATCAACTCATCACATGTAACAGAGAGGGGAAACGGATATCTGAAATACCATATGTTGAGAAGACGAATCCCACATGTGGTGCAAACTGCCCTGCACGAATTTATGTGCACCATAGGGAGCTCAGCATGCAAGTTCGTTGCACTATTGAAAACAATGATCAATCAGGTATTAGACCAAATCAGACATATCAATCGCTTGTGAATGCTGCTGGTGGTCACAATGAGTTGGGATTCATTGAAAAAGATGTTAGAAACTACATCACTAGGGAGATTCAGAATGTGTCGGAAGAAGAAGACGCAAATGAGCTAGGAAACTACTTCTACAGAATGAAGGAGTAG 561 0.4118 MDARSYSSDSESATATESIMHFGHDVDEEYIQKAGMTFPSLEVAAAFYKEYAKRAGFSTKMRNTNRCRETKEIKNQLITCNREGKRISEIPYVEKTNPTCGANCPARIYVHHRELSMQVRCTIENNDQSGIRPNQTYQSLVNAAGGHNELGFIEKDVRNYITREIQNVSEEEDANELGNYFYRMKE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61584g00001 186 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 112 - -
Stsc61584g00001 186 Pfam FAR1 DNA-binding domain 47 114 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61584g00001 Stsc-Chr61584 5623 6837 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc61584g00001 FAR1 5e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61584g00001 - - aip:110271906 201.83