Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61581g00002 ATGGAGGAGGGAAGTTCGAATCATCTCGATCTGAATTCGGATTGTCAAAGTGAGCAATTGAATGAGCAATATCAGTTTTTGTGTAATGTTGACGAAGAGTACGTCCCTCGGGTTGGGATGACATCTGTAACATGTGAAGAAGCTAACTATTTCTATAAGAAGTATGCAAAACGAGCTAGATTTGCTTTTAAAATCAGAAATTCACAGAGGAATAAAGAGATCAGTGCAATCAAGAATCTACTCTTCACATGTACTCGAGAGGGTAAAAGGACATCTGATATACCTGAAGCTGAGAAGACGAATTTGATGTCTCCGGCAAACTGTCCTGCAAGGATTTATGTCCACATATAG 351 0.3932 MEEGSSNHLDLNSDCQSEQLNEQYQFLCNVDEEYVPRVGMTSVTCEEANYFYKKYAKRARFAFKIRNSQRNKEISAIKNLLFTCTREGKRTSDIPEAEKTNLMSPANCPARIYVHI 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61581g00002 116 Pfam FAR1 DNA-binding domain 51 115 IPR004330 -
Stsc61581g00002 116 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61581g00002 Stsc-Chr61581 8667 9463 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc61581g00002 FAR1 1.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61581g00002 - K04278 aip:107614666 88.9669