Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61525g00001 ATGGTGAAGTTCACAGCTGAAGAGCTCCGTCGTATTATGGACTACAAACACAACATTCGTAACATGTCTGTGATTGCTCATGTCGATCACGGAAAATCAACTCTAACGGATTCTCTGGTGGCTGCTGCCGGAATTATTGCCCAAGAAGTAGCAGGGGATGTCCGTATGACTGATACCCGGGCAGATGAAGCTGAGCGTGGTATTACAATCAAGTCTACTGGTATATCTCTCTACTATGAGATGAGTGATGAGGCCCTCAAGAGTTACAAGGGAGAGCGCCAAGGAAATGAGTATCTCATCAATCTCATTGATTCACCTGGGCACGTCGATT 331 0.4622 MVKFTAEELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMSDEALKSYKGERQGNEYLINLIDSPGHVD 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61525g00001 110 PRINTS GTP-binding elongation factor signature 65 73 IPR000795 GO:0003924|GO:0005525
Stsc61525g00001 110 PRINTS GTP-binding elongation factor signature 21 34 IPR000795 GO:0003924|GO:0005525
Stsc61525g00001 110 PRINTS GTP-binding elongation factor signature 101 110 IPR000795 GO:0003924|GO:0005525
Stsc61525g00001 110 Pfam Elongation factor Tu GTP binding domain 17 110 IPR000795 GO:0003924|GO:0005525
Stsc61525g00001 110 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 IPR031157 -
Stsc61525g00001 110 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 17 110 IPR000795 GO:0003924|GO:0005525
Stsc61525g00001 110 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 8 110 - -
Stsc61525g00001 110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 110 IPR027417 -
Stsc61525g00001 110 Gene3D - 3 110 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61525g00001 Stsc-Chr61525 1 1656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61525g00001 1 110 Eukaryotic Initiation Factors Gene Family AT1G56070 93.636 6.14e-67 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61525g00001 K03234 - aew:130772524 215.698