Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61494g00001 ATGACGTATGGCGAAGCCTTTTCTCAACACGAAGAGAGATTGGGGAAAGAATCGGACAAGATCGAGACATGGCAGTCTGCTATGCGTGGACTATGCGAACTCATTGGAATAGAGTGCCACAAAAAGTATGAAACTAAGCTTATCCAAATGATTATTAAAGACGTCTCTGCTAGATTACCTCCTTTGCATTTACAAATCAAAGAAGAGGCCATAGTTGGATTAGATTCTCGTTTTGATGAGGAGGAGGTGAAATTGTTTCTAGATAAAGGCAATAATGATGCGGTTCACATGCTAGCAATTCATGGACCTCCTGGCATAAGCAAAATCACATTTGTTGCGTATATTTATAACATTATTATTAGCAACGACGACCAATATACCGCTGCAAGTTTTATTTCTAATATTAGAGAAAAATCAAAAGTAAAAGATCTTCAATCAATGTTGTTAGCTGAGATGGGCGAGAAGAGAGAAAGCAGTGAGGGTGATACAAATAATGGAGCCCAAGAAATCATACGCAAACTCGGTGTTAAAAAGGTTCTCTTAGTGTTGGATGATGTTGATAAGATAGAACAGTTGAAATCGTTGGCCGGCGGGTTCAATTGGTTTGGTCTTGGTCGTAGGATTATCATAACAACAAGGCATCCAACTTTGCTGAATAGACATAGAGATCATGACAAAATTAAAAGATATAAAATGTCAGAGCTAAATCCTGAAGACTCTCTCAAACTCTTTTATCAGTATGCATTTGGCGAGAGCCAACCAGAAGAAAACTTTGCAAATTTTGCTACTCGGTACTCAGGCATTAAGTATTGCAAAGGGTTCTCACTTGGCCTTAAAAGCACTAGGCAACAAATTGAAAGACTATAG 867 0.3841 MTYGEAFSQHEERLGKESDKIETWQSAMRGLCELIGIECHKKYETKLIQMIIKDVSARLPPLHLQIKEEAIVGLDSRFDEEEVKLFLDKGNNDAVHMLAIHGPPGISKITFVAYIYNIIISNDDQYTAASFISNIREKSKVKDLQSMLLAEMGEKRESSEGDTNNGAQEIIRKLGVKKVLLVLDDVDKIEQLKSLAGGFNWFGLGRRIIITTRHPTLLNRHRDHDKIKRYKMSELNPEDSLKLFYQYAFGESQPEENFANFATRYSGIKYCKGFSLGLKSTRQQIERL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61494g00001 288 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 279 IPR044974 GO:0006952
Stsc61494g00001 288 Gene3D - 1 64 IPR035897 -
Stsc61494g00001 288 Pfam NB-ARC domain 81 279 IPR002182 GO:0043531
Stsc61494g00001 288 PRINTS Disease resistance protein signature 173 187 - -
Stsc61494g00001 288 PRINTS Disease resistance protein signature 271 285 - -
Stsc61494g00001 288 PRINTS Disease resistance protein signature 97 112 - -
Stsc61494g00001 288 Gene3D - 65 228 IPR027417 -
Stsc61494g00001 288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 280 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61494g00001 Stsc-Chr61494 10201 11347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61494g00001 95 278 WRKY Transcription Factor Family AT5G45050 28.261 3.75e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61494g00001 - - adu:107462955 323.939