Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61489g00001 ATGGAGTTTGTTCTCCAATACCTTCCCTCAAATTCAACCTTATCCTTCTTTCTTTTCTTTTTCACGGTGGTGCTTATCATATTTGCAAGATCGAAAACAAAACCACAAAACTCAAAATTGCCACCAGGACCACCAAAAGTACCCCTTATAGGGAACATGCACCAGCTTAGTTCTATGCCTCACCGTGGCCTAACAAAATTAGCACAAGAATATGGCCCTCTTATGCACATAAAGCTAGGTTCACTCTCAACCATAGTTGTTTCTTCATCTGAAATGGCCAAAGAAGTTATGAGAACACATGACATAATATTTGCAAATAGGCCTCACAATCTTGCTGCTGATATTATAACCTATGGTTCTAAGGGGATGAGTTTTTCGCCTCATGGAAGCTATTGGAGGCAGATGAGGAAGATTTGTACTTTCGAGCTATTAACACCGAAGCGAGTCGAATCGTTTCGGTCGATCCGGGAACAAGAAGCATCAANNNNNNNNNNTCATGGGTCTATCATTAATTTCAGCAAGGTTATATATTCAGTGTCATATGGGTTAACATCAAGAGTTGCCTTTGGGGAAAAGTCAACGGACCAAGAAGCGTTCATACAAGCTATGAAGGATGTGTCCAAAGTTGTTTCTGGTTTCTCTTTGGCTGATTTGTATCCTTCATTTGAAGTGCTTAGTGTTGTGACAGGGTTAAGATCAAGAACAGAGAAGATTCATCAAGAACTAGATAGGATCCTTGGGAAGATTGTGAGAGATCACAAGGGAAAAAAGGAAGTGAACGAAAAGTCAACGGAGGATATTGTTGATGTCTTATTAAAGCTTCAGAAGCAGAGCAACCTTGAGCACCCTCTATCTGACAATGTTATCAAAGCAACAATTTTGGATATCTTTGCTGCGGGAAGCGGCACCTCAGCGAAAACGTTAGAGTGGTCAATGTCAGAACTTATCAAGAACCCAAGCGTGATAGAAAAAGCACAAGCCGAGATAAGAAGGGTGTTTGATTCAAGAGGGTGTATAGACGAAACAAACCTCCATGAAATCAAGTATTTAAAAGCAGTAATCAAAGAAACACTTCGCTTACATCCTCCAGTTCCTCTTTTATTGCCAAGGGAATGCAGTGAGAGATGTGAAATCAATGGCTATGAAATCCCGGCCAAGAGCAAGGTAATTGTTAATGCTTGGGCAATTGGGAGGGACCCAAGATACTGGAATGAAGAAGATGCTGAGAAATTTGATCCTGAAAGGTTCCTTGATGGTTCTATTGATTTCAAAGGCGCAGATTTTCAGTTCATTCCATTTGGTGCTGGTAGAAGAATTTGTCCTGGAATCACATTTGGGGTTGCTAGTGTTGAACTCATACTTGCAAATTTGCTTTTTCATTTTGATTGGAAGCTGCCAAATGGTGAGAATCCTGAAGATCTTGATATGTCAGAATCATTTGGAATGTCCATTAGAAGAAAACATGATTTGTACTTGATTCCTACAATGTATCATCATCACTCTTCTGCTTATTAG 1515 0.398 MEFVLQYLPSNSTLSFFLFFFTVVLIIFARSKTKPQNSKLPPGPPKVPLIGNMHQLSSMPHRGLTKLAQEYGPLMHIKLGSLSTIVVSSSEMAKEVMRTHDIIFANRPHNLAADIITYGSKGMSFSPHGSYWRQMRKICTFELLTPKRVESFRSIREQEASXXXXHGSIINFSKVIYSVSYGLTSRVAFGEKSTDQEAFIQAMKDVSKVVSGFSLADLYPSFEVLSVVTGLRSRTEKIHQELDRILGKIVRDHKGKKEVNEKSTEDIVDVLLKLQKQSNLEHPLSDNVIKATILDIFAAGSGTSAKTLEWSMSELIKNPSVIEKAQAEIRRVFDSRGCIDETNLHEIKYLKAVIKETLRLHPPVPLLLPRECSERCEINGYEIPAKSKVIVNAWAIGRDPRYWNEEDAEKFDPERFLDGSIDFKGADFQFIPFGAGRRICPGITFGVASVELILANLLFHFDWKLPNGENPEDLDMSESFGMSIRRKHDLYLIPTMYHHHSSAY 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61489g00001 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Stsc61489g00001 504 PANTHER CYTOCHROME P450 71B11-RELATED 23 495 - -
Stsc61489g00001 504 FunFam Cytochrome P450 71D8 33 494 - -
Stsc61489g00001 504 CDD CYP71-like 70 490 - -
Stsc61489g00001 504 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61489g00001 504 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61489g00001 504 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61489g00001 504 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61489g00001 504 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61489g00001 504 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61489g00001 504 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61489g00001 504 Gene3D Cytochrome P450 25 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61489g00001 504 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61489g00001 504 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61489g00001 504 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61489g00001 504 Pfam Cytochrome P450 41 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61489g00001 504 SUPERFAMILY Cytochrome P450 41 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61489g00001 Stsc-Chr61489 1905 4767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61489g00001 19 496 Cytochrome P450 AT5G25180 40.733 6.03e-133 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61489g00001 - - gmx:100818000 730.709