Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc61484g00007 | ATGTCGGAAGTTGTTGCAAAGGACCCTGCGATTAAGCTCTTTGGGAAGACGATACCGGTGCCGGAGATTCCTCCCGGATCCGGCGACCTCACCGGACCTTCGGTACTATTGTCCGGTGATGCTGCTGATGACAGTGTTGATCAGAATAACGCCTCTTCCACGAACTCCAGCAGCAGCAGCGATGCACATGAGCTAGAAGAAATTGATAACAAGGATACACCGGGAAATAAACCAACTGATGGAAAGAAGGAAGAAGCAGCACCAACGCATTCATCGGAAATTGCTAATCCAGATACTGGGACTGGTGAAGAATCCATTAGCCCGTCCACCGAAAAGGAAGCCATGGCCTTGAAAACTTCCAAGAACGAAGAAGAACAATCGGAGACAAGTAATTCACAGGATAAGACCCTCAAAAAGCCAGACAAAATTCTGCCGTGCCCCCGTTGTAATAGCATGGACACCAAGTTTTGTTACTACAACAACTATAACGTCAACCAACCCCGCCACTTCTGCAAGAATTGTCAGAGATACTGGACTGCTGGCGGAACCATGAGGAACGTGCCTGTAGGTGCCGGTCGCAGGAAGAACAAGAACTCTGCTTCTCACTATCGACAGATAACTGTCCCTGAAGCAGCAATGCTGCAAAATAACATGAAAGACTTGCCAAATGGAGTCCATCATCCTCCTTTGATGTGCAACGGCACAGTCCTTACATTTGGGTCTGATGCACCCTTGTGCGAGTCAATGGCATCTGTTTTGGACCTTTCTGAAAAAGCTGCACAAGATTACATGAGGAATGGATTTGCTAAGCCTGAAGAGCTAAGAATTCGGGTTCCCGGCGCGAGTGGAGAGAAAGGGGACAATCAATCCAATAAATCTTCAGTTAACTCTGCAAAACCAATGGGAGGTATAACCAACAGTGGCTCCCAAGAAAAATCTATGCAGAATGGTCACAGCTTCACACAACAAATTCCTTACTTTCCCGGGCCCCCTTGGCCTCTCCCTTGGAATCCGGTGCAGTGGAACTCTTCGGTGCCACCACCTGCTTTTTGCGCACCAGGATTTGCCATGCCTTTCTATCCCGCAACAGCTTATTGGGGTGTCTCAGGTGCATGGAACATGCCATGGCTAGCACAACCATCATCACCTAAAGCTGCAGCCACAAACTCTGGGCCTAACTCCCCAACCTTGGGCAAACATTCAAGAGAAGAAAACATGTTTAAATCAAATGAGCCGGGTGGTGTGAATGAAGACAAACAAAGCAAAGAGAATCATAAAGAAAAGTGTCTTTGGGTTCCAAAAACACTAAGAATTGATGATCCGGAAGAAGCAGCAAAAAGTTCTATATGGACTACGCTCGGAATCAGACATGATAAGGATGACTCAGTTCTTGGGGAAGGACTCTTCAAACCATTCCCTTCGAAGTACCACGAAAAGAGTCATCCGATGCATGCCTCACCCGTATTGCAGGCCAATCCAGCAGCATTGTCTAGGTCACTAAACTTTCATGAGACTTCATAA | 1521 | 0.4721 | MSEVVAKDPAIKLFGKTIPVPEIPPGSGDLTGPSVLLSGDAADDSVDQNNASSTNSSSSSDAHELEEIDNKDTPGNKPTDGKKEEAAPTHSSEIANPDTGTGEESISPSTEKEAMALKTSKNEEEQSETSNSQDKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRQITVPEAAMLQNNMKDLPNGVHHPPLMCNGTVLTFGSDAPLCESMASVLDLSEKAAQDYMRNGFAKPEELRIRVPGASGEKGDNQSNKSSVNSAKPMGGITNSGSQEKSMQNGHSFTQQIPYFPGPPWPLPWNPVQWNSSVPPPAFCAPGFAMPFYPATAYWGVSGAWNMPWLAQPSSPKAAATNSGPNSPTLGKHSREENMFKSNEPGGVNEDKQSKENHKEKCLWVPKTLRIDDPEEAAKSSIWTTLGIRHDKDDSVLGEGLFKPFPSKYHEKSHPMHASPVLQANPAALSRSLNFHETS | 506 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc61484g00007 | 506 | Pfam | Dof domain, zinc finger | 141 | 198 | IPR003851 | GO:0003677|GO:0006355 | |
Stsc61484g00007 | 506 | MobiDBLite | consensus disorder prediction | 92 | 115 | - | - | |
Stsc61484g00007 | 506 | MobiDBLite | consensus disorder prediction | 62 | 89 | - | - | |
Stsc61484g00007 | 506 | MobiDBLite | consensus disorder prediction | 382 | 400 | - | - | |
Stsc61484g00007 | 506 | MobiDBLite | consensus disorder prediction | 284 | 322 | - | - | |
Stsc61484g00007 | 506 | PANTHER | CYCLIC DOF FACTOR 2 | 1 | 506 | IPR045174 | GO:0003700|GO:0006355 | |
Stsc61484g00007 | 506 | ProSitePatterns | Zinc finger Dof-type signature. | 146 | 182 | IPR003851 | GO:0003677|GO:0006355 | |
Stsc61484g00007 | 506 | MobiDBLite | consensus disorder prediction | 116 | 142 | - | - | |
Stsc61484g00007 | 506 | ProSiteProfiles | Zinc finger Dof-type profile. | 144 | 198 | IPR003851 | GO:0003677|GO:0006355 | |
Stsc61484g00007 | 506 | MobiDBLite | consensus disorder prediction | 1 | 144 | - | - | |
Stsc61484g00007 | 506 | MobiDBLite | consensus disorder prediction | 279 | 322 | - | - | |
Stsc61484g00007 | 506 | MobiDBLite | consensus disorder prediction | 43 | 61 | - | - | |
Stsc61484g00007 | 506 | MobiDBLite | consensus disorder prediction | 380 | 427 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc61484g00007 | Stsc-Chr61484 | 16309 | 19380 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc61484g00007 | 8 | 506 | C2C2-Dof Transcription Factor Family | AT5G39660 | 44.190 | 4.26e-115 | 345 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Stsc61484g00007 | zf-Dof | 3.2e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc61484g00007 | - | - | gmx:100788247 | 695.656 |