Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61476g00001 ATGGCTGATTTTGGTACCTATTCCCTATTACTTCTCATTTGGCTAGCCTCAACCTTATTTCTAAGACTAATCTTCACAAAACTTGGCATCATAAATAGGTCACCACACCTTCCACCAAGCCCCAGAGCCCTTCCAATAATAGGTCACCTCTACCTTCTAACAAAGCTTCCTCACCAATCATTTCACAAGATCTCAACACGCTATGGCCCCTTGGTTTATCTCTTGTTTGGTTCAAGGCCTTGTGTCCTTGTTTCTTCACCTGAAATGGCAAGGCAATGCCTCAAGACACATGAAACATGCTTCTTGAACAGACCCAAGAGGAGTAACCTTGATTACATCACTTATGGTTCCTCTGATTTTGTTTTGGCACCTTATGGACCTTATTGGAGGTTCATGAAGAAGCTTTGTATGACTCAACTCCTCGGTGGCCGTATACTCCATCAGCACCTTCCCATTAGAGCAGAAGAAATAAGGCTATTCTTGAAGGGGATGATGAAAAAGGCTGAGTTGAGAGAGGAGGTGAATGTTGGGTCAGAGCTAGCAATGCTATCAAACAACATAATCACAAGGATGGCTTTGAGAAGGAGGTGTTGTGATGTTGGAGGAGAAGGTCACCAACTCATTGAGCTTGTTAAGGAGATGACTGAGCTTGGTGGCAAGTTCAACCTGGGAGATATGTTGTGGTTTTTGAAGAGGTTTGATTTGCAAGGCTTTGGAAAGAGGCTTGAGAGTGTTAGGAGTAGGTATGACGCTATAATGGAGAGGATCATGAAGGAGCATGAGCATGCAAGAGGGAATAATAATGGAGATGATCAACCAGCTGTGAAGGATTTGCTAGATATTTTGCTTGATATCTATGCTGATCAAAGTTCTCAGATTAGATTAACAAGAGAAAATATTAAAGCCTTCATTATGAACATGTTTGGTGCTGGAACAGAGACATCAGCAGTCACAATAGAATGGGCCTTATCTGAGTTAATAAACCACCCAGAAATGATGCTAAAAGCAAGAGCAGAGATTGATGCAGTAATTGGCAAGAACAGATTGGTAGAGGAATCAGACATTCAAAACCTTCCCTATCTTCAATCCATAGTAAAAGAAACAATGAGGCTTCACCCAACTGGGCCCTTAATAGTGAGGCAATCAACAGAAGATTGCAATGTTAATGGATACCACATTCCATCAAAAGCCACTGTGTTTGTGAATGTTTGGGCAATTGGGAGGGACCCATGTTACTGGAAGGAGCCACATGAGTTCAAGCCAGAGAGGTTCATGAATAAAGAGGGAGAGAGTGTGTTGGATTTGCAGGGACAGAATTTTGAGTTGCTGTCATTTGGTGCTGGGAGAAGGAGTTGTCCTGGTGCTGCTTTGGCTTTGAATGTTATTCCTACTACATTGGCTGCTATGATTCAGTGCTTTGAATGGAAGGTTAGGGTTAATGGTGAAGATGGGAAGAATAATAATAATGGAATTGTTGATATGGAAGAAAGGCCTGGAATGACACTTCCTAGGGCACATCCCTTGATGTGCATTCCTCTGGTTAGAATGTGTCCTTTTGTGTGA 1563 0.4229 MADFGTYSLLLLIWLASTLFLRLIFTKLGIINRSPHLPPSPRALPIIGHLYLLTKLPHQSFHKISTRYGPLVYLLFGSRPCVLVSSPEMARQCLKTHETCFLNRPKRSNLDYITYGSSDFVLAPYGPYWRFMKKLCMTQLLGGRILHQHLPIRAEEIRLFLKGMMKKAELREEVNVGSELAMLSNNIITRMALRRRCCDVGGEGHQLIELVKEMTELGGKFNLGDMLWFLKRFDLQGFGKRLESVRSRYDAIMERIMKEHEHARGNNNGDDQPAVKDLLDILLDIYADQSSQIRLTRENIKAFIMNMFGAGTETSAVTIEWALSELINHPEMMLKARAEIDAVIGKNRLVEESDIQNLPYLQSIVKETMRLHPTGPLIVRQSTEDCNVNGYHIPSKATVFVNVWAIGRDPCYWKEPHEFKPERFMNKEGESVLDLQGQNFELLSFGAGRRSCPGAALALNVIPTTLAAMIQCFEWKVRVNGEDGKNNNNGIVDMEERPGMTLPRAHPLMCIPLVRMCPFV 520
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc61476g00001 520 CDD CYP93 69 512 - -
Stsc61476g00001 520 FunFam Cytochrome P450 family protein 31 510 - -
Stsc61476g00001 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Stsc61476g00001 520 SUPERFAMILY Cytochrome P450 38 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 18 509 - -
Stsc61476g00001 520 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 Pfam Cytochrome P450 38 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61476g00001 520 Gene3D Cytochrome P450 30 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc61476g00001 Stsc-Chr61476 3614 6825 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61476g00001 1 515 Cytochrome P450 AT5G06900 51.064 0.0 548
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61476g00001 K24188 - gmx:100807524 820.846