Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61421g00003 ATGGAGCTATTAACAGCAAAACGTGTTCAATCTTTTAGGGCCATAAGAGAAGAAGAGGTTTTTGAGATGATTAAATCAATATCTCAAAGTGAACGCTCCATTGTTAATCTTAGCAAGAAGATTTTCTCATTGACTTATGGGATAGCAGCTAGGGCATCATTTGGTAAGAGGTGCAGTTACCAGCAAGCTTTTGTAGCAGCTATTGAGGAATTAATGCTGTTAGCAGGAGCAAATAGTGTAGCTGATCTCTATCCTTCTGTTAAGGTGTTTCAAGTGATGAGTAAAACCAAAGCTAGGATGGAAGAACTTCACAAGAAGACTGATAAAATATTACAAGACATCATAGATGATCACAAGAATAAAAAAGAAGGTAGCCATCATTGTGAAGAAGTAGTTGAAGATCTAGTTGATGTTCTTCTCAAGTTTCAAAAGGAGGACTCAGAATTTCCCTTGGATGATGACACCATCAAAGCAGTTGTTCAGGACATGTTTGTTGGTGGTGGCGAAACATCCTCAGCGGTTGTGGATTGGGCAATGGCTGAAATGATAAAGAAACCGAAAGTCATGGAAGCAGCACAATCTGAAGTTAGAAGGGTTTATGGTAACATAGGGTATGTGGATGAATCAGAATTGCATCAATTGACATACCTCAAATGTATCATCAAAGAAACATTAAGGTTACACCCATCTTTGCCTTTGTTAGTTCCAAGAAGTAACAGAGAGACATGCCAAATCATGGGATACGATATTCCAGCTAATTGTAAAATCATGATCAATGCTTGGGCAATTGGAAGAGATCCAAGGTATTGGGTTGATGCTGAGAGTTTTATGCCAGAGAGATTTCTTGATAGTTCAATTGATTACAGAGGCATAAACTTTGAACTTATTCCATTCGGTGCTGGAAGAAGAATCTGTCCCGGAATTGCATTTGCTACACCAAACATGGAGTTGCCACTTGCTAAATTGCTTTATCATTTTGATTGGAAGCTTCCTGATGGAATCAAGAATGAAGAACTTGACATGACTGAATTGTTTGGGACCACTGTTAGAAGAAAGAATGATCTATGTTTAATTCCCATTACTACTCATCAACCTTAA 1098 0.3807 MELLTAKRVQSFRAIREEEVFEMIKSISQSERSIVNLSKKIFSLTYGIAARASFGKRCSYQQAFVAAIEELMLLAGANSVADLYPSVKVFQVMSKTKARMEELHKKTDKILQDIIDDHKNKKEGSHHCEEVVEDLVDVLLKFQKEDSEFPLDDDTIKAVVQDMFVGGGETSSAVVDWAMAEMIKKPKVMEAAQSEVRRVYGNIGYVDESELHQLTYLKCIIKETLRLHPSLPLLVPRSNRETCQIMGYDIPANCKIMINAWAIGRDPRYWVDAESFMPERFLDSSIDYRGINFELIPFGAGRRICPGIAFATPNMELPLAKLLYHFDWKLPDGIKNEELDMTELFGTTVRRKNDLCLIPITTHQP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61421g00003 365 Gene3D Cytochrome P450 1 354 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 PRINTS P450 superfamily signature 166 183 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 PRINTS P450 superfamily signature 305 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 PRINTS P450 superfamily signature 219 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 PRINTS P450 superfamily signature 296 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 CDD CYP71-like 1 355 - -
Stsc61421g00003 365 SUPERFAMILY Cytochrome P450 2 358 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 298 307 IPR017972 GO:0005506|GO:0016705
Stsc61421g00003 365 FunFam Os06g0641600 protein 57 358 - -
Stsc61421g00003 365 PANTHER OS08G0105600 PROTEIN 1 362 - -
Stsc61421g00003 365 PRINTS E-class P450 group I signature 305 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 PRINTS E-class P450 group I signature 295 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 PRINTS E-class P450 group I signature 44 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 PRINTS E-class P450 group I signature 175 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 PRINTS E-class P450 group I signature 259 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 PRINTS E-class P450 group I signature 155 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 PRINTS E-class P450 group I signature 218 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00003 365 Pfam Cytochrome P450 7 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61421g00003 Stsc-Chr61421 13001 15930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61421g00003 2 359 Cytochrome P450 AT3G26310 41.509 3.18e-94 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61421g00003 - - adu:107496273 543.117