Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61421g00002 ATGGAGTTATTAACAGCAAAGCGTGTTCAATCTTTTAGGCATATAAGAGAAGAAGAGGTTTCAAAGTTGGTCAAAGCAATATCTCAAAGTGAAGGCTCCATTTTTAATCTCACTCAGAAGATTTTTTCAATGACCTATGGAATAGCGGCTAGAGCAGCATTTGGTAAAAAATATAGCTACCAAGAAGCTTATATATCATCTGTTGAGGAAGCATTGCATCTAGCAGGAGAAAATTTTATTGGTGATCTTTATCCTTCAATGAGAGTAGTACTTGAAATGATGAGTAGAACAAAGGCTAAGCTTAAAGAACTGCACAAAAAGACTAATAAGATGTTGCAAGACATCATAGATGATCATAGAAATAGAAGTGGCATATGTGAAGAAGGTGAAGATCTAGTTGATGTTCTTCTCAAGTTTCAACAAAAAGACTCTGAATACCCCTTGACTGATGACAACATCAAAGGAGTCATCCAGGACATGTTTAGTGGTGGGGGAGAAACATCCTCATCGGTTGTAGATTGGGCAATGACTGAAATGATGAAGAAACCAAAAGTGATGGAAAGAGCACAAGCTGAAATTAGAAGGGTTTATGGTAACAAAGGGTATGTGGATGAATCAGAATTGCACCAATTGATATACCTCAAGTGTATCGTCAAAGAAACTCTAAGGTTACATCCATCTGCGCCATTGTTAGTTCCAAGAGTGAACAAAGAACCATGCCAAATCATGGGATATGATATTCCAGCCAATTCTAGAACTATTATCAATGCTTGGGCAATTGGAAGAGATCCAAGGTATTGGGATGATGCCATGAATTTTAAGCCTGAGAGGTTTCTTGATAATTATTCAATTGATCAAAGAGGCACAAACTTTGAGTTTATTCCATTTGGTGGTGGAAGAAGAATGTGTCCTGGGATTGCATTTGCTACACCAAACATGGAGTTGCCACTTGCTAAATTGCTTTACCATTTTGATTGGAAGCTTCCCAATGGAATCAAGAATGAGGAACTTGATATGACTGAGTTGTTTGGAATCACTATGAGAAGAAGAAATGATCTATGCTTGATTCCCATTATTCATCATCAACCTTAA 1092 0.3727 MELLTAKRVQSFRHIREEEVSKLVKAISQSEGSIFNLTQKIFSMTYGIAARAAFGKKYSYQEAYISSVEEALHLAGENFIGDLYPSMRVVLEMMSRTKAKLKELHKKTNKMLQDIIDDHRNRSGICEEGEDLVDVLLKFQQKDSEYPLTDDNIKGVIQDMFSGGGETSSSVVDWAMTEMMKKPKVMERAQAEIRRVYGNKGYVDESELHQLIYLKCIVKETLRLHPSAPLLVPRVNKEPCQIMGYDIPANSRTIINAWAIGRDPRYWDDAMNFKPERFLDNYSIDQRGTNFEFIPFGGGRRMCPGIAFATPNMELPLAKLLYHFDWKLPNGIKNEELDMTELFGITMRRRNDLCLIPIIHHQP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61421g00002 363 FunFam Predicted protein 161 355 - -
Stsc61421g00002 363 PANTHER OS08G0105600 PROTEIN 1 361 - -
Stsc61421g00002 363 Gene3D Cytochrome P450 2 356 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 296 305 IPR017972 GO:0005506|GO:0016705
Stsc61421g00002 363 PRINTS E-class P450 group I signature 172 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 PRINTS E-class P450 group I signature 152 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 PRINTS E-class P450 group I signature 303 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 PRINTS E-class P450 group I signature 256 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 PRINTS E-class P450 group I signature 44 62 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 PRINTS E-class P450 group I signature 293 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 PRINTS P450 superfamily signature 216 227 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 PRINTS P450 superfamily signature 303 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 PRINTS P450 superfamily signature 163 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 PRINTS P450 superfamily signature 294 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 SUPERFAMILY Cytochrome P450 2 356 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61421g00002 363 CDD CYP71-like 1 353 - -
Stsc61421g00002 363 Pfam Cytochrome P450 7 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61421g00002 Stsc-Chr61421 7840 10308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61421g00002 1 361 Cytochrome P450 AT1G13110 39.037 2.88e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61421g00002 - - adu:107496273 606.675