Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61417g00004 ATGGCATCCAATAATAATAACGAAACGAAGTTTGTAGTGAGTGACCTTGAGCAGCAACAACAACTAGAGAATAATGAAGAAGAAGAAGAAGCAGCAAAGAAGAAGAAGGAGTTTGATTACTCAAAAAGATCCCAGTGGCTGCGAGCAGCCGTCCTGGGAGCGAACGACGGGCTGGTTTCGACCGCGGCCCTGATGATGGGAGTAGGGGCAGTGAGGCAAGACATGAAGGCCATGGTGTTGTCGGGCTTCGCGGGCCTCGTGGCAGGTGCATGCAGCATGGCCATTGGGGAGTTTGTCTCTGTGTACTCACAGTTAGACATAGAGATTGCTCAAATGAAGAGACAACAAGAAGATGAAGAAGAGAAAGAGAGAGAGGGTTTGCCGAATCCATTGCAAGCAGCAGCAGCATCAGGTTTCGCGTTCTCGGTAGGTGCAATGGTTCCTCTTCTTGCGGCATCATTCATAAGTGAGTATAAGGTCAGGTTAGGTATCGTTTTGGGATCGGTTAGCTTGGCTTTGATTCTGTTTGGTTGGTTGGGTGCGACTCTTGGTAAGGCTCCTCCATGCAGGTCTTGTGTTAGGGTCTTCCTTGGTGGTTGGTTAGCCATGGCTATAACTTTTGGCCTCACCAAGTTGATTGGCGAAACCGCCCTTTAG 657 0.4916 MASNNNNETKFVVSDLEQQQQLENNEEEEEAAKKKKEFDYSKRSQWLRAAVLGANDGLVSTAALMMGVGAVRQDMKAMVLSGFAGLVAGACSMAIGEFVSVYSQLDIEIAQMKRQQEDEEEKEREGLPNPLQAAAASGFAFSVGAMVPLLAASFISEYKVRLGIVLGSVSLALILFGWLGATLGKAPPCRSCVRVFLGGWLAMAITFGLTKLIGETAL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61417g00004 218 Coils Coil 102 125 - -
Stsc61417g00004 218 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 20 213 IPR008217 GO:0005384|GO:0030026
Stsc61417g00004 218 Pfam VIT family 123 210 IPR008217 GO:0005384|GO:0030026
Stsc61417g00004 218 Pfam VIT family 47 123 IPR008217 GO:0005384|GO:0030026
Stsc61417g00004 218 MobiDBLite consensus disorder prediction 1 20 - -
Stsc61417g00004 218 MobiDBLite consensus disorder prediction 1 36 - -
Stsc61417g00004 218 Coils Coil 16 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61417g00004 Stsc-Chr61417 18712 19422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61417g00004 1 218 Nodulin-like Gene Family AT3G43660 62.844 3.80e-97 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61417g00004 K22736 - gmx:100814343 278.485