Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61406g00003 ATGAATAATCAAAAAATTGATGTTTGTTTTAGGTGGTCCCTTATAGCTGGAAGATTGCCAGGGAGAACAGACAATGAGATTAAGAACTATTGGAACACTCACATAAGAAGGAAGCTTTTGAGCAGAGGAATCGACCCTGCTACTCATAGGCCTCTCAATGATTCTACTTCTGCTTCTCATAATCACAACATCCAAGAACAACAACAACAACAACCGTCTTCTCTTGTTGCAGCCACAACCACCACCATATCTTTTGCTTCTTCTGCTTCTGCTTCTGCTGCTGTTAAACAAGAACAAGATACCATTACTACTACTCTTACTACTACTAGTGCTACTTGCAACGCAAACATGTTTGGGATTATGGAGAAGAACAACAACATCATCAAGGATTATTCAATGGAAAGGTGCCCTGACTTGAATCTTGAGTTGACAATTAGTCCTCCACGCCATCTCGATGAACCTGATCACCACAAATTCAGTGGAATAGAGAGAGCCCTTTGCTTTGTTTGCAGTTTGGGTTTGCAAAACAGCAAGGATTGCAGGTGTGGATACGCCACCGCTAATGCAAATGTTAATGGTAGCAGCAATAGTAATGGCAACACCACCACCACCACAACCACCACCGCTTCTGCTGGTGGCTATGATTTCTTGGGCTTGAAAACAGGTAGTGTTTGGGATTATAGAAGCTTGGAAATGAAGTGA 702 0.4217 MNNQKIDVCFRWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNDSTSASHNHNIQEQQQQQPSSLVAATTTTISFASSASASAAVKQEQDTITTTLTTTSATCNANMFGIMEKNNNIIKDYSMERCPDLNLELTISPPRHLDEPDHHKFSGIERALCFVCSLGLQNSKDCRCGYATANANVNGSSNSNGNTTTTTTTTASAGGYDFLGLKTGSVWDYRSLEMK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61406g00003 233 PANTHER F14D16.11-RELATED 11 135 - -
Stsc61406g00003 233 Gene3D - 3 75 - -
Stsc61406g00003 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 39 IPR017930 -
Stsc61406g00003 233 SUPERFAMILY Homeodomain-like 10 43 IPR009057 -
Stsc61406g00003 233 CDD SANT 11 35 IPR001005 -
Stsc61406g00003 233 MobiDBLite consensus disorder prediction 50 76 - -
Stsc61406g00003 233 Pfam Myb-like DNA-binding domain 11 34 IPR001005 -
Stsc61406g00003 233 MobiDBLite consensus disorder prediction 44 76 - -
Stsc61406g00003 233 ProSiteProfiles Myb-like domain profile. 11 35 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61406g00003 Stsc-Chr61406 14507 15384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61406g00003 11 233 MYB Transcription Factor Family AT4G38620 39.823 1.20e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc61406g00003 Myb_DNA-binding 7.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61406g00003 K09422 - dcr:108205758 169.474