Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61403g00002 ATGGGGCATTTATCTTCTATGTTCAATGGTTTGGCAAGGTGGAAGAAGGGAAGAAGTTCTGGCAGATGTGTTGGTAGAGATGCTGCTGAAGCTATGGCAAAAGAAGCCAAGAAAAATGACTTAATTCTGTGCAGCTCCGGCACTGTCAATGTTGATGGTTCAAAGAACTATGCATCAATCTTTTCCAAGAAAGGCCAGAAAGGTGTGAACCAAGATTGCTGCGTAGTCTGGGAGGAATATGGATGCCAAGAAGACATGATATTCTGTGGGATATTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCAAAGAGAGTGAGAGAATCAATGCCATCATCTTTGCTATGCAACTGGCAAGAGGCACTTGCACAATCTCCCCTTGATGTTGAGAAAGAGAAGAAGGACCACCGCTTCAACATATGGAAGCACTCTTACTTGAAGACTTGTGCTGCCATTGATCAAGAACTCTTTCAGTACCGCAAGATCGACTCCTTTTACAGCGGAACCACTGGTGAACTCATCATTATAGCAAATGTAGGTGATTCCCGTGCTGTGTTAGCTACATCATCAGATGATGGAAGTTTGGTTCCAGTTCAATTAACAGTTGATTTCAAGCCCAATTTACCCCAGGAGGCAGAGAGAATAATGCAGTGCCAGGGGAGGGTGTTCTGCTTACATGATGAGCCAGGGGTGCATAGGGTGTGGCTGCCGGACGAGGACTCTCCAGGGCTCGCCATGTCTAGGGCTTTTGGTGATTACTGCATCAAAGACTATGGCCTTATATCAGTGCCTGAGGTCACACACAGACATATAAGCACCAAAGACCAGTTTGTTGTTCTAGCCACTGATGGGGTTTGGGATGTGATCTCCAATGAAGAAGCAGTGGACATTGTATCATCAACACCGGACAAAGCAAAGTCGGCGAAGCGCTTGGTGGAGTGTGCGGCGCACGCATGGAAGCGCAAGCGGCGGGGGATAGCCATGGATGACATTTCAGCTATTTGTCTCTTCTTCCATTCTTCTCCTTCTTCACCTCAGCAAGTTACCTCAGTTGCCACCCTAAAATAG 1068 0.471 MGHLSSMFNGLARWKKGRSSGRCVGRDAAEAMAKEAKKNDLILCSSGTVNVDGSKNYASIFSKKGQKGVNQDCCVVWEEYGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPSSLLCNWQEALAQSPLDVEKEKKDHRFNIWKHSYLKTCAAIDQELFQYRKIDSFYSGTTGELIIIANVGDSRAVLATSSDDGSLVPVQLTVDFKPNLPQEAERIMQCQGRVFCLHDEPGVHRVWLPDEDSPGLAMSRAFGDYCIKDYGLISVPEVTHRHISTKDQFVVLATDGVWDVISNEEAVDIVSSTPDKAKSAKRLVECAAHAWKRKRRGIAMDDISAICLFFHSSPSSPQQVTSVATLK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61403g00002 355 CDD PP2Cc 56 338 IPR001932 -
Stsc61403g00002 355 SMART PP2C_4 49 336 IPR001932 -
Stsc61403g00002 355 FunFam Probable protein phosphatase 2C 34 48 340 - -
Stsc61403g00002 355 PANTHER PROTEIN PHOSPHATASE 45 336 IPR015655 GO:0004722|GO:0006470
Stsc61403g00002 355 Gene3D - 43 340 IPR036457 -
Stsc61403g00002 355 SUPERFAMILY PP2C-like 52 340 IPR036457 -
Stsc61403g00002 355 ProSiteProfiles PPM-type phosphatase domain profile. 57 338 IPR001932 -
Stsc61403g00002 355 Pfam Protein phosphatase 2C 165 311 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61403g00002 Stsc-Chr61403 14774 18340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61403g00002 1 339 PP2C-type Phosphatase Gene Family AT3G05640 70.370 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61403g00002 - - gmx:100801309 612.453