Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61395g00003 ATGGCTGACGAAGTGGTTCTACTAGATTTCTGGCCAAGCCCCTTCGGCATGAGGGTTAGAATAGCTTTCGCTGAAAAAGGAATCCAGTATGAGGGAAGAGAAGAAGACTTGAGCAATAAGAGTCCCTTGTTGCTGAAGATGAACCCTGTCAACAAGCAAATCCCTGTTTTGATTCACAAGGGAAGACCAATCTCTGAATCACTCATCATTGTTCAGTACATTGATGAGGTTTGGAACAATAACAAGAATTTGCTTCCCTCTGATCCTTATCAGCGAGCCAATGCAAGGTTTTGGGCTGATTATATTGACAAAAAGATTTACTCAACGGGGAGATTGGTGTGGGGAACAACAGGGGAGGTTCAAGAGAAAGCAAAGAAGGAGCTGAGAGAGAGCTTTAAGGTGCTTGAAAATGAGTTGGCAGAAAAGAATTATTTTGGGGGAGACATGTTTGGTTTGGTTGATGTGGCTCTCATTCCCTTCTACAGCTGGTTCTACACTCTTGAGACCACTGCCAATTTCAGCATCACTGACGAATTTCCCAGGCTTGTGTCTTGGGCCAAGCGTTGCATGCACAGGGATAGCGTTTCAAACTCTGTTCCTGATCACTACAAAATCTATGACTTCCTTTTGGACCTTAAGAACAAGATGCACTGA 654 0.4388 MADEVVLLDFWPSPFGMRVRIAFAEKGIQYEGREEDLSNKSPLLLKMNPVNKQIPVLIHKGRPISESLIIVQYIDEVWNNNKNLLPSDPYQRANARFWADYIDKKIYSTGRLVWGTTGEVQEKAKKELRESFKVLENELAEKNYFGGDMFGLVDVALIPFYSWFYTLETTANFSITDEFPRLVSWAKRCMHRDSVSNSVPDHYKIYDFLLDLKNKMH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61395g00003 217 Gene3D Glutaredoxin 1 87 - -
Stsc61395g00003 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Stsc61395g00003 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
Stsc61395g00003 217 Gene3D - 88 217 - -
Stsc61395g00003 217 FunFam Tau class glutathione S-transferase 1 87 - -
Stsc61395g00003 217 FunFam Glutathione S-transferase U20 88 217 - -
Stsc61395g00003 217 CDD GST_N_Tau 5 78 - -
Stsc61395g00003 217 SFLD Main (cytGST) 2 216 - -
Stsc61395g00003 217 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Stsc61395g00003 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Stsc61395g00003 217 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Stsc61395g00003 217 Pfam Glutathione S-transferase, C-terminal domain 119 193 IPR004046 -
Stsc61395g00003 217 Coils Coil 118 138 - -
Stsc61395g00003 217 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Stsc61395g00003 217 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Stsc61395g00003 217 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61395g00003 Stsc-Chr61395 12309 13808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61395g00003 1 216 Glutathione S-transferase Gene Family AT1G78380 60.185 6.45e-98 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61395g00003 K00799 - twl:119982746 342.813