Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61393g00002 ATGAATGGGGTTCAGAACAGAAGAGTTCACAATGTTGAGAAACCTTTCCCTGGCTGCCTGGGAAGAATGGTTAACCTCTTTGATTTGACTGCTGGGGTTTCTGGAAACAAGTTACTCACCGATAAGCCACATCGTGATGCTTCTTCGTTTTCAAGAAGTCAATCAGATGTGGCTAGGATCACCAGTCCTTCATTTGGTGATCACATAGAGGATAAGCTGATGGTTTCAGACTCAATGAGAGGATCATCTCAGAATAGAATCAATGGAACACCTATCAAGATGCTCATAGACCAAGAGATGTCCAGAGAAATTGTTTCCAAGCATAATCCACCTAATGTGGTTGCCAAATTAATGGGGCTTGAAGCCCTCCCAAGGGGGGAGCCTAATTTGGCCATGGAGAGAAGCTACAGAGGAGATTATTCTCAACATATTTGTGGTCATTCAGGGACACCATTCCGACAATGGCAGCTGGAAGATAGGTTTATGGACAAAGAAATGCTTCATGAAGGTCATCCGAACACAGAACAGATTGCTTACAGAGATATTTATGAAATATGGCTTCAATCACAGAGAATGAACAATGTAAGAGACACGACGCCAGATGAAGAAAAGTGGACTGAAGATGTTAGTGCAAAAAAAATGGCATTCATTCGTCAGAAATTTATAGAAGCAAAACGTCTCTCTACGGATGAGAGACTACGCCAGTCCAAGGAGTTTGATGAAGCCTTGGAAGTTTTAAGCTCCAATAATGACCTATTAATCCGGTTATTGGATTCTCAGAATCTTTATGAGCTTCAGTCTACTCCGATTGCTGAGACAAAGCGTATTACTGTTCTTAAACCGTCGAAGATGGTTGACCGTGAAAAACCCTGTGGGAAGGGCAAGAAGAATGATAAATGTGTTAAAAGGCCAACAAATATTGGTCAAGCAGCTGCTTGGGAGAAAACTAGTCCTGTGTATTCTCCAGCCAGTCAGAAGGTTGATGATTTCCCAGTTCAACCTACTCGAATAGTGGTATTGAAACCAAGCTCTGGGAAGTCTCATGAGATTAAGGCCGTGCTTTCTCCGACAACTTCATCCCCTCGGAATCTGCACAGTGGAAGTTTATATCATGGTCTTGAAGATTGTGAAGCACTAGAGCCAACAACAGATGCTAACGAAATCACACAGCAAATGCCTGAAAGCCTGAGGAGCCACCCAAGAGACGAAACATTCCATTCTTCAGTATTTTCCAATGGATATATCGGAGATGAAAGTTCATTTAACAAATCAGATCATGAGTATGCTGCAGGAAATTTCAGTGATTTGGAGCTTATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGGCAGCCCTTTTTCTTCATCATCATTCAGTCGTGCATCCTGTTCTCCTGAGTCATCTGTTTGCCGAGAGGCCAAGAAGCGACTTTCTGAAAGATGGGCCATGATGGCATCAACTAAAGGTACACAAGAGCATAGGCATCTTCGGAGAAGTTCTACGTTGGGTGAGATGCTTGCTCTTTCAGATATGAAGAAAGTTATAATATCTGAGGTTGAGGATATTAATAAAGACCAAAAACCTAGCAGCTCTGTTTCTTGTAGTCGTAATTTCAATGAAGAAATATGCATGGATGGGTCTCCTAAAAATCTTGCCAGGTCAAAATCTGTCCCTGTATCTTCCACTGCCTATGAAACTGGGCCGAGCGTTGAGGTTTGTAATCATGATACTAGCAAAGCTGATGTCTCCATGGAGCTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACAAATTTCTTTTTCTCAAGAAATAAGAAATCAACCAAGGAAAAATCTTTTCTATCTCAATCTAAAGACGGATCTCAATCACCTCTCACTGATACGTCAGTATCTCCAGTAAATTCACGTGGAGTTAGGGATGGCGAGTCTCAAAGCTTCAACAGTGGCGCCTTTGCAGAGTGTTCTCTTCCGGCTGTATATGAATCATCTGGAAAATCACATTCAGACTCTAATGGACAAGGCGTAGTATCTCTAGAGTCTGCAGTGCCTGGTACATCAACAGAAAACCATGATCAGCCGAGTCCAATCTCAGTTTTAGAACCTCCATTTGAAGATGAGAATGCAGCTCATGAGTCCTTAGATTGTATGAAGGGTGGTCAGCTGGGACCACGGCTGCTTATGAAATCTAATTTAATTGATAAATCACCACCGATAGAATCGNNNNNNNNNNCATGTGCAGAGGTAGCAAGTCCCTATCCATTAAAACCATCATTGGTTTCCCTAGACACCAAGGTGGAGGAACAAGATTGGTTTGTCCTCGTTGATAAACTACTATCAGCCGCCGGACTTGATGATCAAGTGCGGTCCGACTCATTTTACCCAAGATGGCATTCCCTTGACAGTGCTTTGGATCCATCATTGAGGGATAACTACGCCAATCCGGACGACAAGGAGTCTCAGCCTCTCCACGAAGCCCGGCGAAGGCAGAGGAGATCCAACCAGAAGCTAGTATTTGATTGTGTCAATGTAGCCCTAATGGAGATTACCGGTTATGGATCGGAGAAGTACTTAAGGTTGTGGGGTGGGAGTAGTCATTGCATGTTCCCAGTCCCAGAGGGTGCAGCTCCTCCATTGGTGGACCTCATTGTGGCCCAGATGAAGGATTTAATATCTGGTGGGATGAGGGCTCTTTGGGGTGACTGTGGGGACAGTAACAGCCTGGTTGTGGAGAGTGTTGTCAGAAAAGAGGTTGTGGGGAATGGGTGGATTGAGCTTATGGGTTTGGAGATGGATATTTTGGTCAAGGTGGTAGAGGGGAAGTTGCTAGAAGAACTTGTGGAGGATGCTGTGCTTGATTTGACAGGCAGAGCTTGA 2898 0.4355 MNGVQNRRVHNVEKPFPGCLGRMVNLFDLTAGVSGNKLLTDKPHRDASSFSRSQSDVARITSPSFGDHIEDKLMVSDSMRGSSQNRINGTPIKMLIDQEMSREIVSKHNPPNVVAKLMGLEALPRGEPNLAMERSYRGDYSQHICGHSGTPFRQWQLEDRFMDKEMLHEGHPNTEQIAYRDIYEIWLQSQRMNNVRDTTPDEEKWTEDVSAKKMAFIRQKFIEAKRLSTDERLRQSKEFDEALEVLSSNNDLLIRLLDSQNLYELQSTPIAETKRITVLKPSKMVDREKPCGKGKKNDKCVKRPTNIGQAAAWEKTSPVYSPASQKVDDFPVQPTRIVVLKPSSGKSHEIKAVLSPTTSSPRNLHSGSLYHGLEDCEALEPTTDANEITQQMPESLRSHPRDETFHSSVFSNGYIGDESSFNKSDHEYAAGNFSDLELMSPSPRHSWDYINRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMASTKGTQEHRHLRRSSTLGEMLALSDMKKVIISEVEDINKDQKPSSSVSCSRNFNEEICMDGSPKNLARSKSVPVSSTAYETGPSVEVCNHDTSKADVSMELTKSKSMKSSFKGKVTNFFFSRNKKSTKEKSFLSQSKDGSQSPLTDTSVSPVNSRGVRDGESQSFNSGAFAECSLPAVYESSGKSHSDSNGQGVVSLESAVPGTSTENHDQPSPISVLEPPFEDENAAHESLDCMKGGQLGPRLLMKSNLIDKSPPIESXXXXCAEVASPYPLKPSLVSLDTKVEEQDWFVLVDKLLSAAGLDDQVRSDSFYPRWHSLDSALDPSLRDNYANPDDKESQPLHEARRRQRRSNQKLVFDCVNVALMEITGYGSEKYLRLWGGSSHCMFPVPEGAAPPLVDLIVAQMKDLISGGMRALWGDCGDSNSLVVESVVRKEVVGNGWIELMGLEMDILVKVVEGKLLEELVEDAVLDLTGRA 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61393g00002 965 MobiDBLite consensus disorder prediction 622 654 - -
Stsc61393g00002 965 MobiDBLite consensus disorder prediction 670 724 - -
Stsc61393g00002 965 Pfam Domain of unknown function (DUF4378) 779 956 IPR025486 -
Stsc61393g00002 965 MobiDBLite consensus disorder prediction 375 410 - -
Stsc61393g00002 965 Pfam DUF761-associated sequence motif 110 124 IPR032795 -
Stsc61393g00002 965 MobiDBLite consensus disorder prediction 815 834 - -
Stsc61393g00002 965 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 964 - -
Stsc61393g00002 965 MobiDBLite consensus disorder prediction 818 834 - -
Stsc61393g00002 965 Pfam Protein of unknown function (DUF3741) 218 261 IPR022212 -
Stsc61393g00002 965 MobiDBLite consensus disorder prediction 619 654 - -
Stsc61393g00002 965 MobiDBLite consensus disorder prediction 670 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61393g00002 Stsc-Chr61393 12903 18567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61393g00002 1 962 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.496 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61393g00002 - - gmx:100816611 1433.31