Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61376g00001 ATGCCCGTCACCCCCTCCCACGACAGACACCTCCTAGCCGCACGATCCCAGCCACGTGTCACCTTCCCACACCCCGAGATGCTTGACCTTGGAGACTTTCCCACCAGCGCCGAATCCGGCGTCTTCCAAGCCTCCTCAGAGGAACTCAACTTCAACATCTTCCATCTAACCAACGATAACATTAACTACCTCAAGGACAAAGCCAAGGGCAATAACGTAAATTCTCGCGTCACGGGCTTCAACGTCGTAACTGCTCTCATCTGGCGGTGCAAGGCTCTGTCCTTCTCCCCGCCCGATCCGAATCGGTCGTCCACCATACTCTACGCGGTGGATATCCGGTCGAGGCTGAGCCCTCCGCTGCCGAGATCGTACGCCGGGAACGCGGTTCTGACGGCGTACGCGACGGCGAAATGCGAGGTGCTGGAGAAGGGATCGTTTGCGAGGTTGGTGGAGATTGTGACGGAGGGTGCGAAGAGAATGAACGATGAGTATGCGAGGTCAATTATAGACTGGGGAGAGTTGCATAGCGGGTTTCCAAATGGGGAAGTTTTGGTGTCTTCGTGGTGGAGGTTAGGATTTGAAGAGGTGGAGTATCCGTGGGGCAAGCCAAGGTATTGTTGTCCTGTGGTGTACCATAGGAAGGATATTATACTGCTGTTTCCTCCTCTTGGCGGCGGGGATGGGATTAATGTTATAGTGGCACTTCCTCCTAAGGAAATGGAGAAATTCAAGACTCTCTTCTATGAATTCTTGATCTGA 759 0.5362 MPVTPSHDRHLLAARSQPRVTFPHPEMLDLGDFPTSAESGVFQASSEELNFNIFHLTNDNINYLKDKAKGNNVNSRVTGFNVVTALIWRCKALSFSPPDPNRSSTILYAVDIRSRLSPPLPRSYAGNAVLTAYATAKCEVLEKGSFARLVEIVTEGAKRMNDEYARSIIDWGELHSGFPNGEVLVSSWWRLGFEEVEYPWGKPRYCCPVVYHRKDIILLFPPLGGGDGINVIVALPPKEMEKFKTLFYEFLI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61376g00001 252 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 247 - -
Stsc61376g00001 252 Gene3D - 35 249 IPR023213 -
Stsc61376g00001 252 Pfam Transferase family 3 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61376g00001 Stsc-Chr61376 571 1777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61376g00001 1 249 Monolignol Biosynthesis Gene Families AT5G48930 27.757 3.20e-20 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61376g00001 K13065 K15400 gmx:100805510 390.193