Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61361g00005 ATGGCAACCAAACATAAGGGTCGTGCCATAGGAATCGATCTTGGAACTACATACTCGTGTGTTGCAGCATGGGAAGAGCAAAATGGTCGTGCTGAGATTATTGTGAATGATCAAGGCAACAGAACAACTCCTTCTTTCGTTGCCTTCACTGATACTCAAAGATTGATTGGTGATGCTGCTAAAAATCAAGCTGCATCCAACCCCTCCAACACCATCTTTGATGCTAAAAGATTGATTGGAAGAAAATACAAAGATCCTGCAATTGAGTGTGATCTTAAGTTGTGGCCATTCAAGGTTGTACCTGGTGTTGATGACAAACCCATGATTATGGTGAACTACAAAGGCATGGAAAAGTGCCTTGCTGCTGAAGAAATCTCATCTATGATCCTCTCAAAGATGAAGGACATTGCAGAGGCGTATATGGAGTCTTCTGTGGAAAATGCTGTGATTACAGTCCCTGCTTATTTCAATGACTCGCAGCGAAAAGCCACCAAAGATGCCGGCATCATTGCCGGCCTTAATGTGATGAGAATCATCAACGAACCAACTGCTGCAGCTCTTGCATATGGCCTTCAAAAGAGAGCTAACTGTTCCGAGAAGCGCAATATTTTCATCTTTGATCTTGGTGGTGGTACCTTTGATGTGTCTCTAGTCACAATTGATGGTGATAACTTTGAAGTTAAGGCCACTGCTGGAGACACTCACCTCGGAGGGGAAGACTTTGATAACAGAATGGTGAGTCATTTGGTACAAGAGTTCAAAAGAAAGAATAGAGTTGACATTACTGGGAATCCCAGATCATTGAGGAGGTTGAGAAATGAATGCGAGAAAGCTAAAAGAACACTTTCAAATGCTAATGAGACTACAATTGAGATAGATGCTTTGTTTGAAGGCAATGATTTTCGTTTTTCTATGACTCGTGCGAGGTTTGAAGAACTCAATAGGGACTTGTTTGAGAAGTGCATGGAGATTGCTCAGAATTGTCTTGATGATGCCAAGATGGCCAAGAGTGATGTACATGATGTAGTCCTTGTTGGTGGATCTTCAAGGATTCCAAAAGTGCAGAGATTATTGCAGATTTTCTTTGAAGGGAAGGAGCTTTGCAATAGTATCAACCCGGACGAAGCTGTTGCTTATGGTGCTGCAGTTCAAGCTGCATTGTTGAGTGAAGAGTATAGCATTGTCCCAAACTTGGTTCTGCTAGATATCACTCCTCTTTCACTTGGTATAGCCACTCATCGAGATTTAATGAGTGTAATGATTCCTAGGAATACCGCCATTCCTGTAAAGATGGATGCTAGCTTTGGAACAATTGAAGATTATCAATCCACTGCTACATTCCCAGTGTATGAAGGTGAAAGGACAAAAGCCAGTGAGAATAACTTGCTTGACAAGTTTTCCCTTTCGGGACTTCCTCGTGTTCCTCGAGGCCATGCTATCAATGTTATGTTTGAACTTGATTTTGATGGTATCTTGAAGGTTAGTGCTGAGGATGAAACAACTGGCAGCAAGAATGGAATTACCATCACTAATGAGAAAGGAAGACTCTCAAGTATTGAGATTAAGAGAATGATTGAGGAAGCTGCAGTGTTCAGGGAAGAGGATAAGAAGTTCAAGAAGATGGTGGAAGCAAAGAATGCTTTGGATGATTATATTTACAGGATGGAGAAAGCTATGAAGAGTTTTGATGTAAGATCTAAGGTTTCGCCTTCTGAAAAGGAGATAATAATGGCTGCATTCAGAAAGGGAAAAATATTGCTTAGGAGTGAGGAACATAATGAGGCTTGTGTGTTTGAGGACTATCTGAAAGAGTTACAGAAGATTTGTCAACCAATAATTCCTCACCAGAGGTTAATTGGTGATGCTGCTAAGAACCAGGCTGCTTTTAACCCAACCAACACTGTCTTTGATGCTAAGAGGTTAATTGGTAGGAAATATAGTGACCCTATTATTAAGGATGACCTCATGTTGTGGCCATTTAAGGTCACTTCTGGTGTTAATGACAAACCAGTGATTGTTGTTACTTACAAGGGTCAGCAGAAACACCTTTCTCCAGAAGAAATCTCATCTATGATTCTCACAAAGATGCGTGAGATTGCAGAGGCATACCTGGAGTCACCACGAAAAGCTACCAAAGATGCTGGTGCCATTGCCGGCTTCAATGTTATGCGGATAATCAACGAACCAACAGCAGCAGCTATTGCATATGGCCTTGACAAGAGAGATGATTGTGTTGAAGAGAGAAACATCTTCATCTTTGATCTTGGTGGTGGTACTCTTGATGTGTCTCTCCTTACTATTAAGGACAAGGTCTTTGAAGTTAAGGCCACTGCTGGAAACACTCACCTTGGTGGAGAAGACTTTGATAACAGAATGGTGAACTACTTTGTGGAAGAGTTCAAAACAAGAACAAAGTGGATATTAGTTGAAATCCAAGAGCGCTAA 2445 0.4135 MATKHKGRAIGIDLGTTYSCVAAWEEQNGRAEIIVNDQGNRTTPSFVAFTDTQRLIGDAAKNQAASNPSNTIFDAKRLIGRKYKDPAIECDLKLWPFKVVPGVDDKPMIMVNYKGMEKCLAAEEISSMILSKMKDIAEAYMESSVENAVITVPAYFNDSQRKATKDAGIIAGLNVMRIINEPTAAALAYGLQKRANCSEKRNIFIFDLGGGTFDVSLVTIDGDNFEVKATAGDTHLGGEDFDNRMVSHLVQEFKRKNRVDITGNPRSLRRLRNECEKAKRTLSNANETTIEIDALFEGNDFRFSMTRARFEELNRDLFEKCMEIAQNCLDDAKMAKSDVHDVVLVGGSSRIPKVQRLLQIFFEGKELCNSINPDEAVAYGAAVQAALLSEEYSIVPNLVLLDITPLSLGIATHRDLMSVMIPRNTAIPVKMDASFGTIEDYQSTATFPVYEGERTKASENNLLDKFSLSGLPRVPRGHAINVMFELDFDGILKVSAEDETTGSKNGITITNEKGRLSSIEIKRMIEEAAVFREEDKKFKKMVEAKNALDDYIYRMEKAMKSFDVRSKVSPSEKEIIMAAFRKGKILLRSEEHNEACVFEDYLKELQKICQPIIPHQRLIGDAAKNQAAFNPTNTVFDAKRLIGRKYSDPIIKDDLMLWPFKVTSGVNDKPVIVVTYKGQQKHLSPEEISSMILTKMREIAEAYLESPRKATKDAGAIAGFNVMRIINEPTAAAIAYGLDKRDDCVEERNIFIFDLGGGTLDVSLLTIKDKVFEVKATAGNTHLGGEDFDNRMVNYFVEEFKTRTKWILVEIQER 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61361g00005 814 FunFam Heat shock 70 kDa 237 320 - -
Stsc61361g00005 814 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Stsc61361g00005 814 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Stsc61361g00005 814 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Stsc61361g00005 814 Gene3D - 194 368 - -
Stsc61361g00005 814 SUPERFAMILY Actin-like ATPase domain 614 740 IPR043129 -
Stsc61361g00005 814 PRINTS 70kDa heat shock protein signature 148 168 - -
Stsc61361g00005 814 PRINTS 70kDa heat shock protein signature 477 493 - -
Stsc61361g00005 814 PRINTS 70kDa heat shock protein signature 339 355 - -
Stsc61361g00005 814 PRINTS 70kDa heat shock protein signature 371 391 - -
Stsc61361g00005 814 PRINTS 70kDa heat shock protein signature 60 68 - -
Stsc61361g00005 814 PRINTS 70kDa heat shock protein signature 8 21 - -
Stsc61361g00005 814 PRINTS 70kDa heat shock protein signature 397 416 - -
Stsc61361g00005 814 PRINTS 70kDa heat shock protein signature 211 221 - -
Stsc61361g00005 814 PRINTS 70kDa heat shock protein signature 38 50 - -
Stsc61361g00005 814 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Stsc61361g00005 814 FunFam Heat shock protein 70 10 202 - -
Stsc61361g00005 814 Gene3D - 10 386 - -
Stsc61361g00005 814 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 396 549 IPR029047 -
Stsc61361g00005 814 Gene3D - 614 749 - -
Stsc61361g00005 814 SUPERFAMILY Actin-like ATPase domain 746 806 IPR043129 -
Stsc61361g00005 814 FunFam Heat shock 70 kDa protein 392 545 - -
Stsc61361g00005 814 Gene3D - 750 814 - -
Stsc61361g00005 814 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 545 IPR029047 -
Stsc61361g00005 814 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
Stsc61361g00005 814 FunFam heat shock 70 kDa protein-like 636 691 - -
Stsc61361g00005 814 Coils Coil 268 288 - -
Stsc61361g00005 814 Gene3D - 546 613 IPR029048 -
Stsc61361g00005 814 Gene3D Actin; Chain A, domain 4 237 320 - -
Stsc61361g00005 814 PANTHER HEAT SHOCK PROTEIN 70KDA 9 567 IPR013126 GO:0005524|GO:0140662
Stsc61361g00005 814 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 614 IPR029048 -
Stsc61361g00005 814 FunFam heat shock 70 kDa protein-like 73 128 - -
Stsc61361g00005 814 ProSitePatterns Heat shock hsp70 proteins family signature 2. 752 765 IPR018181 -
Stsc61361g00005 814 Pfam Hsp70 protein 9 613 IPR013126 GO:0005524|GO:0140662
Stsc61361g00005 814 Pfam Hsp70 protein 615 805 IPR013126 GO:0005524|GO:0140662
Stsc61361g00005 814 Gene3D - 73 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61361g00005 Stsc-Chr61361 17729 20715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61361g00005 616 805 Calmodulin-binding Proteins AT3G12580 67.961 2.81e-87 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61361g00005 K03283 - hbr:110636145 944.11