Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61361g00004 ATGGACCTCTTTAGAGAGTGTATGGAAGCAGTTGATAAGTGTCTTAGGGATGCTAACATAGACAAGAATTATATACATGATGTTGTTCTCGTTGGTGGATCTTGTAGGATTCCCAAAGTACAGAAGCTATTGCAGAAATTCTTCGATGATAAAGATCTCTGCAATAGCATTAATCCTGATGAAGCAGTGGCTAATGGAGCAGCAGTTCAAGCTGCATTAGTGAGTAAAGGTATGAAGAATGTTCCAGACATGGTTCTAAGTGATGTTACACCATTGTCACTTGGTATAGCTGTAAAAGGAGATATCAGGAGTGTAGTGATTCCAAGGAATTCTCCCATTCCTATAAAGAAGACAGCAGAATTCATCACAATCTATGATAACCAAGACAATGTACTTGAACAAGTTTATGAAGGTGAGAGGTCGAAAGCGAGTGATAACAACTTGCTGGGCCAGTTCACACTTTCTGGTATTCCTCCTGCTCCTCGAGGCCATCCTATTATGGTATGCTTTGATATTGATTCTAATGGTATTCTTTGTGTATCTGCTAAGGAAAATACCACTGGCAATAGGAACCAGATTACTATAACAGATGACAAAGGAAGAATGTCAAATGAAGAAATTGCAAGACTGGTTAAGGAAGCTGAGAAATACAAGGCTGAAGATATGAAGTTTCTTGAGAAGGTTGAAGCCATAAATGCTTTGGATGATTATGTTTACAAAATGGAGAAAGCTTTAATGGACCAGGGAATTTGTAACATGCTTTCCCAATGTGACATGAACAATATTTGTTATGCAATCAGTAAGGCTAGAAAATTGCTTGATGGTGACAAAGAGCTAGAAGAAATAAATGTGATCAAGGTTGTGCTGTATGAGGTCAAGTTCATCTTTGATCCCATTATGATCATGATTGGCTGGTTGTTTTAA 924 0.3799 MDLFRECMEAVDKCLRDANIDKNYIHDVVLVGGSCRIPKVQKLLQKFFDDKDLCNSINPDEAVANGAAVQAALVSKGMKNVPDMVLSDVTPLSLGIAVKGDIRSVVIPRNSPIPIKKTAEFITIYDNQDNVLEQVYEGERSKASDNNLLGQFTLSGIPPAPRGHPIMVCFDIDSNGILCVSAKENTTGNRNQITITDDKGRMSNEEIARLVKEAEKYKAEDMKFLEKVEAINALDDYVYKMEKALMDQGICNMLSQCDMNNICYAISKARKLLDGDKELEEINVIKVVLYEVKFIFDPIMIMIGWLF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61361g00004 307 Gene3D - 232 303 IPR029048 -
Stsc61361g00004 307 PRINTS 70kDa heat shock protein signature 163 179 - -
Stsc61361g00004 307 PRINTS 70kDa heat shock protein signature 57 77 - -
Stsc61361g00004 307 PRINTS 70kDa heat shock protein signature 83 102 - -
Stsc61361g00004 307 PRINTS 70kDa heat shock protein signature 25 41 - -
Stsc61361g00004 307 Pfam Hsp70 protein 2 277 IPR013126 GO:0005524|GO:0140662
Stsc61361g00004 307 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 229 301 IPR029048 -
Stsc61361g00004 307 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 79 231 IPR029047 -
Stsc61361g00004 307 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 80 235 IPR029047 -
Stsc61361g00004 307 SUPERFAMILY Actin-like ATPase domain 2 74 IPR043129 -
Stsc61361g00004 307 Gene3D - 7 54 - -
Stsc61361g00004 307 Gene3D - 55 72 - -
Stsc61361g00004 307 FunFam Heat shock 70 kDa 78 231 - -
Stsc61361g00004 307 PANTHER HEAT SHOCK PROTEIN 70KDA 1 252 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61361g00004 Stsc-Chr61361 16668 17591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61361g00004 1 300 Calmodulin-binding Proteins AT3G12580 58.278 2.71e-114 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61361g00004 K03283 - gmx:102667578 356.295