Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61353g00007 TTTGGATTGGCGAAAATATGTAAAAAGGATCAAAGTATTATATCTATATTAGGTACAAGAGGAACTCCAGGATATATTGCACCAGAAGTATTTAGCCGAACATATGGCGGAGTTTCTCACAAATCTGATGTATATAGTTATGGCATGTTAATTCTTGAAATTATTGGAGGAAGGCAGAACTATGAAAGTGAAGCATCGCAGAGTAGTGAAAGTTATTTTCCTGATTGGATCTATAAAGATCTTGAGCAAGGCAATATTCCTACAAGGTGTTTGCAACACAAAGAAGAAGAAAATGATATTGTAATGAAAATGACTTCGGTGAGCTTATGGTGTATTCAACCAAATCCAGCAGATAGGCCTTCTATAAGTAAAGTCATAGAGATGTTAGAAGGGCCTCTTGAGGAAGAGCTCTTCCTTCTCCCCAGATTCAAGATCCAAATCACCATAATCTTGAGCAGCAGCAACATTCTTGATCTTCTTGAACCGGATCCAAAATCAGCCCAAGCAAAGCACAAGCCTATCCAAGCTATGAATAAGGAACAAAACAATGCAGACATTGGCAAGGAAATGCATTGGTGGAGCAAGGTACTCCACACGGATGAAGACCCACCTAGAATAAACCCAACCAAACAAGCCCTTAACCCCAAAATGTGCCCAAAATTGCTCCAAATGAAGATGGGGTGCACCAAAGTGAACAAAGTTCCAACCTTTGAAGTAGTAAGCAGCAACCTCAAAACAAAGCAAGATCACAGATAA 756 0.3942 FGLAKICKKDQSIISILGTRGTPGYIAPEVFSRTYGGVSHKSDVYSYGMLILEIIGGRQNYESEASQSSESYFPDWIYKDLEQGNIPTRCLQHKEEENDIVMKMTSVSLWCIQPNPADRPSISKVIEMLEGPLEEELFLLPRFKIQITIILSSSNILDLLEPDPKSAQAKHKPIQAMNKEQNNADIGKEMHWWSKVLHTDEDPPRINPTKQALNPKMCPKLLQMKMGCTKVNKVPTFEVVSSNLKTKQDHR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61353g00007 251 Gene3D Transferase(Phosphotransferase) domain 1 1 137 - -
Stsc61353g00007 251 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 133 IPR045874 GO:0004672
Stsc61353g00007 251 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61353g00007 251 SUPERFAMILY Protein kinase-like (PK-like) 1 149 IPR011009 -
Stsc61353g00007 251 Pfam Protein kinase domain 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61353g00007 Stsc-Chr61353 21477 22840 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61353g00007 1 158 Receptor kinase-like Gene Family AT5G39030 52.761 1.46e-47 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc61353g00007 Pkinase 1.3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61353g00007 - - aip:107635702 188.348