Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc61344g00002 | ATGGATAGTGATGTCGAAGATTCTTGGACGTGTGATAATGATTCTTTTGGAATGCACTCTGATAAGGAATTCTCGGAAGAAGAGAATGATGAAGAGCCTTTGAAAGACGATTATGAGAATGTTGAAGACGAAGATCAAACCAAGAGAATACCGGAGCTATCACGAGATGATATAATGCAACTTGAGTTTACAAATGAGGAGGCTGTCCATCGATTCTACAAGACTTATGCAAGGATACATGGTTTTGCAGTCCGGTTGGATGAAGGCGCAAGGAAGGAAAAAGTTGAGAAGGATGAAAGAACTAGGGACCACCGACCCTTGACTCGAAGTATGTGTCCTGCAAAAATCCGTGCAAGCCTCGACCGGAAAAGTTCTAAGTGGAAAGTCGTATCGTTCTATGAGAAACATTCTCATGATTTGGTGGATCCAATGGACGTTAACATGATGCCGGAGTATCGCAAGTTAAGTTAA | 471 | 0.4204 | MDSDVEDSWTCDNDSFGMHSDKEFSEEENDEEPLKDDYENVEDEDQTKRIPELSRDDIMQLEFTNEEAVHRFYKTYARIHGFAVRLDEGARKEKVEKDERTRDHRPLTRSMCPAKIRASLDRKSSKWKVVSFYEKHSHDLVDPMDVNMMPEYRKLS | 156 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc61344g00002 | 156 | MobiDBLite | consensus disorder prediction | 25 | 40 | - | - | |
Stsc61344g00002 | 156 | Pfam | FAR1 DNA-binding domain | 88 | 141 | IPR004330 | - | |
Stsc61344g00002 | 156 | PANTHER | FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED | 88 | 154 | - | - | |
Stsc61344g00002 | 156 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc61344g00002 | Stsc-Chr61344 | 12084 | 12628 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | FAR1 | Stsc61344g00002 | FAR1 | 6.9e-07 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc61344g00002 | - | - | aip:107620373 | 179.874 |