Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc61341g00004 | ATGAGAGCCACGCCGCCCATTTTCTACTCCACCGTTAAGGTCTTGACAAGGTTTCAAACCAAGAATTATGCTCTGTTAATTCCAGCTCGATTTGCATTAAGAGCTTTCCCCTCCAAGAGGACCGTCGTCACTGTAGTACACGCGAGGGGTCTTCCAATTGACATGAAGTTGCGATGGAGGGGGTCCAACTCTAATGAGGTGTTTCTTACGGGTGGTTGGAAGGCGTTTGCAGCAATGTACAAACTGAGGAATGGTAGTGTCCTGAAGTTTAATGTTTCCTCCGTAGATGAGTCAATTATGTCTATCACTATAATAAACCATTAG | 324 | 0.4506 | MRATPPIFYSTVKVLTRFQTKNYALLIPARFALRAFPSKRTVVTVVHARGLPIDMKLRWRGSNSNEVFLTGGWKAFAAMYKLRNGSVLKFNVSSVDESIMSITIINH | 107 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc61341g00004 | 107 | CDD | B3_DNA | 6 | 90 | IPR003340 | GO:0003677 | |
Stsc61341g00004 | 107 | Pfam | B3 DNA binding domain | 13 | 100 | IPR003340 | GO:0003677 | |
Stsc61341g00004 | 107 | SUPERFAMILY | DNA-binding pseudobarrel domain | 9 | 103 | IPR015300 | - | |
Stsc61341g00004 | 107 | ProSiteProfiles | B3 DNA-binding domain profile. | 10 | 107 | IPR003340 | GO:0003677 | |
Stsc61341g00004 | 107 | Gene3D | - | 2 | 107 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc61341g00004 | Stsc-Chr61341 | 21464 | 21859 | Dispersed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Stsc61341g00004 | B3 | 4.6e-10 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc61341g00004 | - | K09287 | adu:127740618 | 91.6633 |