Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61337g00003 ATGACAACGGGTCCTGAAGTTGATGATGGAACAGAACAAACACACGAGTTTTTGTGTGATGTCGAGGAGGAGTATATTCCGAAAGTTAGAATGACATTTCAAACAGCTGCTGAGGTTGATTTGTTCTACAAAGAGTATGCCAAACGTGCAGGGTTCTCTACTAAAATAAGAAACACAAATAGATGTAAGGAGACAAAGGAAGTAATTAATCAACTCATAACATGTAACAGAGAAGGGAAATAG 243 0.3786 MTTGPEVDDGTEQTHEFLCDVEEEYIPKVRMTFQTAAEVDLFYKEYAKRAGFSTKIRNTNRCKETKEVINQLITCNREGK 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61337g00003 80 Pfam FAR1 DNA-binding domain 42 79 IPR004330 -
Stsc61337g00003 80 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61337g00003 Stsc-Chr61337 10096 10524 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc61337g00003 FAR1 1.9e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61337g00003 - K17604 adu:127741508 77.4109