Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61335g00001 ATGATTGACTCCGGCGTGTGGCCGGAGAGCGAGAGCTTCAAAGATGATGGAATGACCAAAAGCATCCCATCAAAATGGAGAGGGACGTGTGAGGTAGGACAAGATTTCAACGCCTCAAATTGCAACCTAAAGCTTATTGGAGCGAGGTACTTCAACAAGGGTGTGATTGCTGCGAATCCTAACATCACAATTACAATGAACTCAGCACGAGACACGAGGGGGCATGGCACACACACGTCATCCACCGTTGGAGGGAACTATGTGGATGGTGCCTCCTTCTTCGGTTATGCAAAAGGCGTGGCAAGAGGCATCGCGCCGAGGGCCAGGCTAGCCATGTACAAGGTCCTTTGGAACGAGGGCCGACAAGCGTCTGATGTCCTCGCCGGAATGGACCAGGCAATTACTGATGGTGTGGATATAATTTCAATCTCCATGGGCTTCGACAATGTCACTCTCTACGAGGACCCCATCGCCATAGCTTCCTTTGCTGCTATGGAGAAAGGGATTCTTGTTTCTTCGTCGGCCGGGAACGAAGGCCCCGGCCTCGGGACCTTGCACAACGGAATCCCTTGGGTTCTCACCGTCGCGGCGGGCACCATAGACCGCACATTTGGAAGCTTGGAACTAGGAAACGGCATAACCGTTATTGGTTGGACTCTGTTCCCAGCAAATGCAGTTGTTTATGACTTCAGTCTTGTTTATAACAGAACAATCTCTTCATGCGATTCAATCCAGAAGTTGTCGCAAATGGACACATATAATGTCGTTGTCATATGTGATAACTTAAAATCTGTGTCAGTCTTGGACCAACTAAGAGCTACCAGGAAAGCCAACGTTGGTGCCGCCATCTTTATCTCCGAGGATCCAATACTAATTGAAGAGGCATCTGTCTCTGTTCCGAGCATTGTGATCAACCCAAAGGATGCTCCAAAAATTATCAGGTATGCAAAAAGTGGTCCTCAGGCCACTGCCACCATCAAATTCCAACAAACATTTGTTGGAACGAAGCCGGCACCAGCTGCTGCGATTTACACCTCAAGGGGCCCTTCTCCGAGCTACCCGGGCGTCTTGAAGCCGGATGTAATGGCGCCAGGGTCTAAAGTTCTAGCAGCTTTTATTCCTAATGCCCCGGCTGCTAGAATCGGGGAGAATGTGTACCTACCTACTGCCTACAATTTACTATCTGGAACTTCAATGGCTTGCCCCCATGCTTCTGGGGTCGCGGCTTTACTGAAAGCCGCGCGCCCTGAATGGAGTCCGGCTGCGATAAGGTCTGCCATGGTGACAACCGCGAATCCGTTGGACAACACTAAAGGTCCAATTGGGGACAATGGAAATCTGGGCCAATTTGCTTCACCTCTTGTAATGGGAGCAGGTCAAATTGATCCCAATAAAGCTCTTGATCCAGGTTTGGTGTATGATGCAACTCCACAGGACTATGTCAATCTTCTTTGTGCAATGGAGTATACACATAAACAAATCTTAACCATTACTAGATCAAAATCCTATAATTGCGATAAACCATCGTTGGATCTTAACTACCCTTCGTTTATAGCTTTGTATAACAAAAAAGCAAGGACAATGGTGAAGAAATTTAGGAGGACAGTGACCAATGTTGGAGATCTTGGTGAGACTACCTATAAAGCAATTGTGACACATCCTAGGGATTTTGTTGTTACAGTGTCACCTATGAGACTAACATTTGGATACAAGAATGAGAAGCAAACTTATGTTGTTACCATAAATTACACGAGGAACAAGAAGGAAAATGTGTCATTCGGAGACCTGATTTGGGTGGAAGAGGGTGGTGGTGCACATAGGGTTAGGAGCCCCATTGTTGTGGCACCAAATGATATTGTTTAA 1863 0.4729 MIDSGVWPESESFKDDGMTKSIPSKWRGTCEVGQDFNASNCNLKLIGARYFNKGVIAANPNITITMNSARDTRGHGTHTSSTVGGNYVDGASFFGYAKGVARGIAPRARLAMYKVLWNEGRQASDVLAGMDQAITDGVDIISISMGFDNVTLYEDPIAIASFAAMEKGILVSSSAGNEGPGLGTLHNGIPWVLTVAAGTIDRTFGSLELGNGITVIGWTLFPANAVVYDFSLVYNRTISSCDSIQKLSQMDTYNVVVICDNLKSVSVLDQLRATRKANVGAAIFISEDPILIEEASVSVPSIVINPKDAPKIIRYAKSGPQATATIKFQQTFVGTKPAPAAAIYTSRGPSPSYPGVLKPDVMAPGSKVLAAFIPNAPAARIGENVYLPTAYNLLSGTSMACPHASGVAALLKAARPEWSPAAIRSAMVTTANPLDNTKGPIGDNGNLGQFASPLVMGAGQIDPNKALDPGLVYDATPQDYVNLLCAMEYTHKQILTITRSKSYNCDKPSLDLNYPSFIALYNKKARTMVKKFRRTVTNVGDLGETTYKAIVTHPRDFVVTVSPMRLTFGYKNEKQTYVVTINYTRNKKENVSFGDLIWVEEGGGAHRVRSPIVVAPNDIV 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61335g00001 620 ProSiteProfiles Serine proteases, subtilase domain profile. 1 467 - -
Stsc61335g00001 620 MobiDBLite consensus disorder prediction 1 20 - -
Stsc61335g00001 620 FunFam Subtilisin-like protease SBT1.5 1 207 - -
Stsc61335g00001 620 Gene3D - 484 616 - -
Stsc61335g00001 620 Gene3D - 201 333 - -
Stsc61335g00001 620 Pfam Subtilase family 3 436 IPR000209 GO:0006508|GO:0008236
Stsc61335g00001 620 PRINTS Subtilisin serine protease family (S8) signature 71 84 IPR015500 -
Stsc61335g00001 620 PRINTS Subtilisin serine protease family (S8) signature 395 411 IPR015500 -
Stsc61335g00001 620 SUPERFAMILY Subtilisin-like 2 471 IPR036852 GO:0004252|GO:0006508
Stsc61335g00001 620 Gene3D Peptidase S8/S53 domain 1 480 IPR036852 GO:0004252|GO:0006508
Stsc61335g00001 620 CDD Peptidases_S8_3 1 432 IPR034197 -
Stsc61335g00001 620 ProSitePatterns Serine proteases, subtilase family, serine active site. 396 406 IPR023828 -
Stsc61335g00001 620 Pfam Fibronectin type-III domain 511 614 IPR041469 -
Stsc61335g00001 620 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 614 IPR045051 -
Stsc61335g00001 620 CDD PA_subtilisin_like 206 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61335g00001 Stsc-Chr61335 13882 17138 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61335g00001 1 613 Subtilisin-like Serine Gene Family AT5G67090 43.128 7.75e-156 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61335g00001 - - gmx:100806072 924.85