Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61329g00004 ATGGCTAATAATAAAGGATTCAAGCTGAAATTCACTATCCCTTTATTCCAAATGTGTCGTTCTAAAGACACTTCAGCTTTCCCAGGAAACCCTGTAGTTCCTGCAATATACCGTCTTTCTCCGGTGAACCCCAAAACACATGACGTGTCAATACCTCCACCGCCACCATCCTCACCGGAATATAGGGGTAGTAAGGTCACTTCAAGAATAATGTCCTTACGCCAAATGTGCCGTGACGACCACCGTGACAAGCAAGTAAACAGCAGAGGCAGAAGAAGCACATCCAGCGTTCCTTCCAGGAGAAGCAACGTGGCGATTGATAACGAAGAAGAAAGCGAGTCTCTGATTTCTTGCACCACAAGTTTCTCGGACGAGTCTTATTCTCTCAAACCGGAGAGAGAGTTAGGTAGCAGCGGAAGCAGCAGCAGGCACAGGAGGAAGATAAGCAGCGTGAAGAAGGTTCATAGAATGAGGTTCAACAGCGCAAGAGTAGAAGAATTACCGGAAACAGAACAAGTGAAGAAGACAAAGACGAAGACGAAGACGAAGTTTGTGTCGTCGACGGCTTCGACGACAAGGATGAGGCGGAGCAGCGTGGAGGGGAAGGTGAGGGAGAGTTTTGCGGTGGTGAAAAGGTCGAAGGATCCGTACGAGGACTTCAAGAGATCGATGATGGAGATGATAAGGGAGATGGAGATGCGTGATGCAGAGGATTTGCAGCAACTGCTTCAGTGTTTCTTGGCTCTGAACTCTCGGAGCTATCACGATGTGATTGTGCGGGCTTTCATGGAGATATGGCAAGAGATGTTTGTCATGAAGCCTGCGCCTTCTACCTCCACTACCTCCACCTCCACCAACGATATTCTCCAAAGAGATCAACTCCGACTAGGAGAGTAG 897 0.4838 MANNKGFKLKFTIPLFQMCRSKDTSAFPGNPVVPAIYRLSPVNPKTHDVSIPPPPPSSPEYRGSKVTSRIMSLRQMCRDDHRDKQVNSRGRRSTSSVPSRRSNVAIDNEEESESLISCTTSFSDESYSLKPERELGSSGSSSRHRRKISSVKKVHRMRFNSARVEELPETEQVKKTKTKTKTKFVSSTASTTRMRRSSVEGKVRESFAVVKRSKDPYEDFKRSMMEMIREMEMRDAEDLQQLLQCFLALNSRSYHDVIVRAFMEIWQEMFVMKPAPSTSTTSTSTNDILQRDQLRLGE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61329g00004 298 ProSiteProfiles OVATE domain profile. 209 268 IPR006458 -
Stsc61329g00004 298 MobiDBLite consensus disorder prediction 182 196 - -
Stsc61329g00004 298 Pfam Transcriptional repressor, ovate 213 270 IPR006458 -
Stsc61329g00004 298 MobiDBLite consensus disorder prediction 275 298 - -
Stsc61329g00004 298 NCBIfam uncharacterized plant-specific domain TIGR01568 207 269 IPR006458 -
Stsc61329g00004 298 MobiDBLite consensus disorder prediction 170 196 - -
Stsc61329g00004 298 MobiDBLite consensus disorder prediction 45 150 - -
Stsc61329g00004 298 MobiDBLite consensus disorder prediction 275 291 - -
Stsc61329g00004 298 MobiDBLite consensus disorder prediction 127 141 - -
Stsc61329g00004 298 MobiDBLite consensus disorder prediction 74 89 - -
Stsc61329g00004 298 MobiDBLite consensus disorder prediction 90 126 - -
Stsc61329g00004 298 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 98 270 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61329g00004 Stsc-Chr61329 21059 21955 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc61329g00004 Ovate 1.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61329g00004 - - aip:107608440 439.113