Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Stsc61323g00001 | ATGATAAGAGAATGGTGTTGCTCTGCAAGTGCAACGTGTGCTAGTTTCTCTCCACCTTACATGATTAGAGAGAAAAACTTCAAACACCAACCATATATTCTCTGTTCATCACCATCTTCGTCTACTACCATATCTATAACGAAAAGATCTTTATCTGTGTGTCTCATCTGCACCACTTTATCTTCATTCATCTTCCCACTTTCTCCAGCTTCATCCTCTTCTCTCTCTCCTTCCTCAAAGTTCCCCATATCAGAATTCTCAGAGCTCCCCAATTCTGGTGGACTTAAGTTCTTAGACCTCCGTCTTGGTTCCGGTGATGAAGTTCCTTCTGATGGAGACAAGGTTGCAATACATTACTATGGTAGACTTGCAGCAAAACAAGGGTGGCGCTTTGATTCAACCTATGACCATAAAGATGAGAATGGTGATCCTAATCCCTTTGTCTTTGTCCTTGGAAGTGGCAAGGTTATAGATGGAATTGAGATGGCAGTGAGATCAATGAAAGTAGGTGGTATACGAAGAGTCATCATACCTCCACCTCTTGGATATCAAAACACATCACAGGAACCAATCCCACCCAATTTCTTTGACAGGCAGAGGCTGTTCACAACCATATTCAATCCAACTCGTCTTGCTAATGGAGAAGGCTCCACTTTAGGGACACTTATATTTGATATTGAACTCGTTACCCTGAGGCATCAATGA | 705 | 0.4213 | MIREWCCSASATCASFSPPYMIREKNFKHQPYILCSSPSSSTTISITKRSLSVCLICTTLSSFIFPLSPASSSSLSPSSKFPISEFSELPNSGGLKFLDLRLGSGDEVPSDGDKVAIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVFVLGSGKVIDGIEMAVRSMKVGGIRRVIIPPPLGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVTLRHQ | 234 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Stsc61323g00001 | 234 | Gene3D | - | 82 | 231 | IPR046357 | GO:0003755 | |
| Stsc61323g00001 | 234 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 112 | 232 | IPR001179 | GO:0003755 | |
| Stsc61323g00001 | 234 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC | 34 | 234 | IPR044197 | - | |
| Stsc61323g00001 | 234 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 106 | 229 | IPR001179 | GO:0003755 | |
| Stsc61323g00001 | 234 | SUPERFAMILY | FKBP-like | 88 | 231 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Stsc61323g00001 | Stsc-Chr61323 | 12204 | 13643 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Stsc61323g00001 | 38 | 200 | Calmodulin-binding Proteins | AT3G25230 | 25.668 | 1.22e-06 | 47.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Stsc61323g00001 | - | - | aip:107639245 | 375.17 |