Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61321g00003 ATGGCTACTTTCTCTAGCTCTCCACAACTCTTTTCCGCCCTCCCCATCTCCACAACTCATCACCACATCCACTCATCACAAACGCCACCTCCTCAGCCCTCCACCACAACTAGAAATGGGAACCAGGAGATGTTTATCAAATCACAACAACAGAAACAGAAGCCCATCAGCAAACCCACTACTAAGATTGAATCCACTGATTGGATAGCCACTTCTCTCACGAGACGCTTTGGCCTCGGAGCTGGCCTTGCATGGGTTGGCTTTCTTGCTTTTGGTGTCATCTCTGAGCAAATTAAGACTCGCTTTGAGGTCTCTCAGCAAGAGGCCAACACAAGGACACTTGACACACAACAAGAGGTGCTCCTCCCCAATGGCATAAGGTACACTGAATTGAAAGTTGGAGGTGGCGCTTCCCCAAATCCTGGGGATTTGGTTGTCATCGACATAATTGGGAAGGTACAAGGCAGTGGACAAGTATTTGTGGACACAATAGAGAATAAGAAGCCATTGGCACTGGTGATGGGGTCAAGGCCGTATAGTAAGGGAGTATGTGAAGGCATAGAATATGTGCTGAGAACAATGAAGGCAGGCGGTAAAAGGAGAGTCATAGTGCCTCCTTCCTTGGCCTTTGGACAAGCTGGGGCTGATTTCGGCACTTCTATTCAAATACCACCACTTGCAACACTTGAGTATGTTGTTCAAGTTGAAAAAGTCTCCATTGCACCTGCTTAA 732 0.4754 MATFSSSPQLFSALPISTTHHHIHSSQTPPPQPSTTTRNGNQEMFIKSQQQKQKPISKPTTKIESTDWIATSLTRRFGLGAGLAWVGFLAFGVISEQIKTRFEVSQQEANTRTLDTQQEVLLPNGIRYTELKVGGGASPNPGDLVVIDIIGKVQGSGQVFVDTIENKKPLALVMGSRPYSKGVCEGIEYVLRTMKAGGKRRVIVPPSLAFGQAGADFGTSIQIPPLATLEYVVQVEKVSIAPA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61321g00003 243 MobiDBLite consensus disorder prediction 19 39 - -
Stsc61321g00003 243 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 142 239 IPR001179 GO:0003755
Stsc61321g00003 243 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC 1 243 - -
Stsc61321g00003 243 FunFam Peptidylprolyl isomerase 94 241 - -
Stsc61321g00003 243 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 138 235 IPR001179 GO:0003755
Stsc61321g00003 243 Gene3D - 101 238 IPR046357 GO:0003755
Stsc61321g00003 243 SUPERFAMILY FKBP-like 59 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61321g00003 Stsc-Chr61321 4212 5197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61321g00003 131 235 Calmodulin-binding Proteins AT5G48570 31.481 6.44e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61321g00003 - - gmx:100781416 331.257