Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61313g00003 ATGGAAACACCAATCCTCATGCCTTTCATCCTTCTTCTTCTTTGCATCCCTTCCTTCTCAGTTTCTACCTTCACTCCCATTGATAACTACCTTATCAACTGTGGCTCAAACACCAATGCTTCACTCTTCACCAGACCCTTCATTGCTGAAGAACAAGGCTCCACCTTTCTCTCTTCACAAAACTCTATCTCACTCAAACTCCAAAACCCACCTCCAAATTTGCCTTTTTTGTACCACACAGCAAGAGTCTTCACCACCAATGCAAGGTACAGCTTCAACATGAAGAGAAACGGCACCAACTTTGTGCGTTTCCATTTCTACCCTTTTAAAGCTCCGAGCTTTGATCTCAACCATGCTAAATTCAGTGTCTTTGTTAATGGGGTCTCACTCTTAAGGTATTTCCAGCCAGTTAATAATAGTGTCACGGTTAAAGAGTTTATCTTGAAGATAGAATCAGAATTTCTTGAAATTTTGTTTAGGCCTGTTGCTAGTGGTGGTAGTAACTCAGGTTTTGGATTTTTGAATGGTTTAGAGGTATTTTCTGCTCCTGAAGATTTGATTACAGATTATGGAGCTAGGTTTGTTGGTCCTTCTGGGGTGGAAGAGTTCAAGAACCTTTCATCTCAGGTTTTAGAAACTGTGCATAGGATCAATGTTGGTGGTCTGAAAATAACACCATTTAATGATACCCTTTGGAGGACTTGGATTTCTGATGAGGGTTTTCTTGTTTTCAAGGATGCAGCTAAGTCTGCATTTACCACTCACACACCGAATTACCAGAAGGGAGGGGCAACACCAGAGATTGCCCCTGATAATGTTTACATGACTGCTCAGCAGATGAATAGGGAGAACTCGAGTTTAGCTTCGAGGTTCAACATAACTTGGAATTTTTCTGTGGATGCTGGTGGTGTTCCTCACCTTGTGAGGTTGCATTTCTGTGATATCGTTAGTCATGCACTTAGTTTGCTCTACTTTGATGTGTATATCAATGGCTACACTGCAATTAAGGATCTTGATTTGTCGTCCGTTACATTCCACACGCTTGCTTCTCCATACTATGTGGATTTCATCACTGACTCGGATGATTCCGGTGTTATTCAAATAAGTGTAGGTCCTTCTGATCTTAGCAGTTCTATAAGGATGAATGCCATATTGAATGGAGCAGAGATACTGAAGATGGTCAATGTTATCGATTCCGGTGCTTCTCATAGGAAGAAAATATTGTGGGTGTGGATTGGTTCAATTGCTGGAGGAATTGTTGTCTTGTGTTTAGTTGCATCTGCTTTTCTACTTGCTTTCAGATGCAGGAAGAAGAAACCGAAGCGAGGGGCTGTGGAAAGCGTTGGATGGACACCTTTAAGAATGTTTGGAGGGAGTTCCAATAGTAGAATGTCTGAACCTGGCTCTAATGGATACACTGGCTTGAAGATCCCCTTTGCAGATATACAACATGCGACGAATGATTTCGATAGAAGTTTGGTTATAGGATCTGGTGGGTTTGGTATGGTTTACAAAGGAGTACTTAGAGACAATGTTAAGGTTGCTGTTAAGAGAGGCATGCCAGGGTCAAGACAAGGCCTTCCGGAATTTCATACCGAGATAACTGTTTTGTCCAAAATTCGCCATCACCACCTCGTCTCGCTGGTTGGTTTTTGCGAAGAGAATTCGGAGATGATACTTGTGTATGAGTATGTTGAGAAAGGTCCACTTAAAAGGCATTTATATGGCTCTTCCGGCTTGCCGCCTCTCTCGTGGAAGCGGCGTCTTGAGATATGCATTGGTGCTGCCAGAGGACTCCATTATCTTCACACCGGTTTCGCCCAAGGAATCATCCACCGCGACATTAAATCGACCAACATTTTGCTTGATGAAAACTATGTGGCCAAGGTTGCTGACTTTGGCCTTTCAAGATCTGGACCTTGTATCAATGAAACACATGTGAGCACTGGTGTCAAAGGTAGTTTTGGTTATCTTGATCCGGAGTATTTCCGGAGGCAGCAGCTTACCGATAAATCGGATGTTTACTCGTTCGGAGTTGTACTATTCGAGGTTCTTTGTGCTAGACCAGCAGTTGATCCACAACTGACCCGGGAACAGGTGAATTTAGCAGAATGGGCTCTAGAGTATCTGGAGAAGGGCATGCTGGAACACATTGTTGACCCTCGCATTGCCGGGCAGATTAAGCCGAGCTCATTGAAGAAATTCGGCGAAACGGCCGAGAAATGTTTGGCAGAATATGGTGTTGACAGGCCAACTATGGGTGATGTCTTGTGGAACTTGGAATATGCACTTCAGCTTCAAGAAAGTGGACAACAAAGGGAGCCGAACGCGGACGAAGCAGCGAACATGAGTACAACAATTGTTCCTGGAAATTCTTGCAGCAACAGAACAATTGTGAGAGATTATTCAGATGTAAGTAGTAGCCAAGTGTTTTCCCAGCTAATGACCAATGAAGGGAGATAG 2463 0.4336 METPILMPFILLLLCIPSFSVSTFTPIDNYLINCGSNTNASLFTRPFIAEEQGSTFLSSQNSISLKLQNPPPNLPFLYHTARVFTTNARYSFNMKRNGTNFVRFHFYPFKAPSFDLNHAKFSVFVNGVSLLRYFQPVNNSVTVKEFILKIESEFLEILFRPVASGGSNSGFGFLNGLEVFSAPEDLITDYGARFVGPSGVEEFKNLSSQVLETVHRINVGGLKITPFNDTLWRTWISDEGFLVFKDAAKSAFTTHTPNYQKGGATPEIAPDNVYMTAQQMNRENSSLASRFNITWNFSVDAGGVPHLVRLHFCDIVSHALSLLYFDVYINGYTAIKDLDLSSVTFHTLASPYYVDFITDSDDSGVIQISVGPSDLSSSIRMNAILNGAEILKMVNVIDSGASHRKKILWVWIGSIAGGIVVLCLVASAFLLAFRCRKKKPKRGAVESVGWTPLRMFGGSSNSRMSEPGSNGYTGLKIPFADIQHATNDFDRSLVIGSGGFGMVYKGVLRDNVKVAVKRGMPGSRQGLPEFHTEITVLSKIRHHHLVSLVGFCEENSEMILVYEYVEKGPLKRHLYGSSGLPPLSWKRRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCINETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLTREQVNLAEWALEYLEKGMLEHIVDPRIAGQIKPSSLKKFGETAEKCLAEYGVDRPTMGDVLWNLEYALQLQESGQQREPNADEAANMSTTIVPGNSCSNRTIVRDYSDVSSSQVFSQLMTNEGR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61313g00003 820 PANTHER OS07G0166700 PROTEIN 476 767 IPR045272 GO:0004714|GO:0006468
Stsc61313g00003 820 CDD STKc_IRAK 495 761 - -
Stsc61313g00003 820 FunFam receptor-like protein kinase FERONIA 456 564 - -
Stsc61313g00003 820 Pfam Malectin-like domain 32 392 IPR024788 -
Stsc61313g00003 820 Gene3D - 210 395 - -
Stsc61313g00003 820 Gene3D - 29 183 - -
Stsc61313g00003 820 SUPERFAMILY Protein kinase-like (PK-like) 465 761 IPR011009 -
Stsc61313g00003 820 ProSiteProfiles Protein kinase domain profile. 489 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61313g00003 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Stsc61313g00003 820 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
Stsc61313g00003 820 FunFam Receptor-like protein kinase FERONIA 210 395 - -
Stsc61313g00003 820 Gene3D Phosphorylase Kinase; domain 1 459 564 - -
Stsc61313g00003 820 FunFam Putative receptor-like protein kinase 29 183 - -
Stsc61313g00003 820 FunFam Receptor-like protein kinase FERONIA 565 780 - -
Stsc61313g00003 820 Pfam Protein tyrosine and serine/threonine kinase 494 694 IPR001245 GO:0004672|GO:0006468
Stsc61313g00003 820 SMART serkin_6 489 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61313g00003 820 Gene3D Transferase(Phosphotransferase) domain 1 565 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61313g00003 Stsc-Chr61313 10735 13197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61313g00003 2 820 Receptor kinase-like Gene Family AT3G46290 49.297 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc61313g00003 Malectin_like 1.1e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61313g00003 - - gmx:100801169 1249.96