Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61310g00001 ATGGCAACTGATATGCAGAGGCTTATTGGAACCAGTGAAGATGATGACGAAGAAATAGAAATGGATGTGAAAGAAGAGGACGATGGAGATGAAGATGAAGAGGAAAATGGAGGTGATCATGGAAATGCTTCGGAGATGGTAGGGATTGATGGCGGGAATGGTTTAGTGACTACTGGTGGTGACAACAGGTTTCAACAACAGCAGCAGTTTCAAGAGCAAGTTGGAACCCCAGGTGGATCTGCTCGAAGATGTAGACCACTAGAAGAGAAAGAAAGGACAAAGCTAAGAGAGAGGCGCCGGAGGGCTATCACCGCTAAGATCTTGGCAGGGCTTCGCAGGCATGGCAACTACAATCTTAGAGTTAGAGCAGACATAAATGATGTTATTGCTGCTTTAGCAAGGGAAGCTGGGTGGGTGGTTCTTCCTGACGGCACTACTCTTCCTCCAAGATCACAGGGTCAAAGGCCAACTGGTGGTAATTCTGCAGTTGTCACTCCCTCTTCTCCCGTGCCTTCACAACCAACTCCATCTGCTTCCATCAGGGGAGTTGCTTCTGGCTATAGGAGCTCATTAGAGTATAATACATGTCAAGCAAAAGGTGTTTTCATGCCAACTCCATCTCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCCATGGTGGGGGATGGAGAATTACAAAGAGAGAATCAACCTTTGGTTGGCAGTGGTTCATTGGATACTGTTAATGAGAAGCAGATTATTGACTTGCCCCCCAGATTATCAGAGCGTGATCTAGCTGGTACTCCATATGTTCCAGTGTATGTGATGCTACCG 819 0.4664 MATDMQRLIGTSEDDDEEIEMDVKEEDDGDEDEEENGGDHGNASEMVGIDGGNGLVTTGGDNRFQQQQQFQEQVGTPGGSARRCRPLEEKERTKLRERRRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTLPPRSQGQRPTGGNSAVVTPSSPVPSQPTPSASIRGVASGYRSSLEYNTCQAKGVFMPTPSPYDLSSSSRSQTSMVGDGELQRENQPLVGSGSLDTVNEKQIIDLPPRLSERDLAGTPYVPVYVMLP 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61310g00001 273 MobiDBLite consensus disorder prediction 208 239 - -
Stsc61310g00001 273 MobiDBLite consensus disorder prediction 147 181 - -
Stsc61310g00001 273 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 78 190 IPR033264 GO:0003700|GO:0006351|GO:0009742
Stsc61310g00001 273 MobiDBLite consensus disorder prediction 1 64 - -
Stsc61310g00001 273 Pfam BES1/BZR1 plant transcription factor, N-terminal 81 218 IPR008540 -
Stsc61310g00001 273 MobiDBLite consensus disorder prediction 11 38 - -
Stsc61310g00001 273 MobiDBLite consensus disorder prediction 142 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61310g00001 Stsc-Chr61310 171 2037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61310g00001 1 273 Glycoside Hydrolase AT2G45880 56.679 2.36e-82 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Stsc61310g00001 BES1_N 9.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61310g00001 K01177 - gmx:100812659 361.303