Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61300g00002 ATGGGGGAAACAAATTCACGGTCAAATTCGCATAAGCATTGGCGTTTTGGTACGAATTCGCAGCAGAGTATTCAGTTGCGTTCACGCTCGAGTTCGAGATCTTCGTCACCGGAGGAGTCTTCGCCACCAAAGTCTCTCATGGAGAACCTTATGGGCCTTCTTAGGGTTCGAATCAAGCGTGGCATCAACCTCGCCGTTCGTGATGTTCGTAGCAGCGATCCCTATGTTGTCATCAAGATGGGTAAACAGAAACTCAAGACTCGTGTGATTAAAAGGGATGTTAATCCTGAGTGGAATGAGGACCTCACGCTCTCGATTGTAGATCCAAATACTTCAGTCTCACTGACTATATATGACCATGATACTTTTAGCAAAGATGACAAAATGGGAGATGCAGAGTTTGAAATCTCAACATTTATAGAAGCCTTGAAGATGAACGTGACAGGCCTGTCAAATGGTACCGTGCTCAAAAGAATACAACCAAGCCGGGATAACTACCTTGCAGATGAGAGCCGCATCACTTATATCAATGGTAAGCTTGTTCAAGATATGATCCTTAGACTACGAAACGTGGAATGCGGCGAATTGGAAATCCAGCTAAATTGGATTGATCTTCCTGGGTCCAAGGGTTTATGA 636 0.445 MGETNSRSNSHKHWRFGTNSQQSIQLRSRSSSRSSSPEESSPPKSLMENLMGLLRVRIKRGINLAVRDVRSSDPYVVIKMGKQKLKTRVIKRDVNPEWNEDLTLSIVDPNTSVSLTIYDHDTFSKDDKMGDAEFEISTFIEALKMNVTGLSNGTVLKRIQPSRDNYLADESRITYINGKLVQDMILRLRNVECGELEIQLNWIDLPGSKGL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61300g00002 211 CDD C2_ArfGAP 52 194 - -
Stsc61300g00002 211 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 49 209 IPR044562 -
Stsc61300g00002 211 SMART C2_3c 53 148 IPR000008 -
Stsc61300g00002 211 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 48 146 IPR035892 -
Stsc61300g00002 211 Gene3D C2 domain 46 209 IPR035892 -
Stsc61300g00002 211 MobiDBLite consensus disorder prediction 11 43 - -
Stsc61300g00002 211 Pfam C2 domain 52 139 IPR000008 -
Stsc61300g00002 211 ProSiteProfiles C2 domain profile. 33 149 IPR000008 -
Stsc61300g00002 211 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61300g00002 Stsc-Chr61300 7337 9205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61300g00002 84 211 C2H2 Transcription Factor Family AT1G70790 57.692 2.20e-49 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61300g00002 - - adu:107490639 360.918