Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61299g00004 ATGAGGTCTAATTCCCAATACCCATTTTCTCTCATAAATTTTTTCTCCATTATCTTAATTACAACTGCAAGAGCTGAAGAACCAGCTTCCAAATCCTTCTTAATCTCATGCGGTTCTTCCACCGGTGGAACAGATTCCAACGGAAGAAAATGGTTGCCAGATTCCAAGTACCTCACAGCACCTTCTTCCATTGACACAAAGAGTTCAACAGCAAAAGAACAAGACCCTTCTATTCCTTCACAAACACCATACATGTCCGCAAGGGTCTTCACTTCTTCTTCTTCTTCTTCATCAACTTACCAGTTCCCTGTTTCACCAAACACACGCCACTATATTCGCCTCCACTTTTACCCTTCCATCTACGATTCTTCTCTTGATCCAAACAACGCATACTTCTCCGTTCACGCAAATGGCTTCACTCTGCTCAACAACTTCAGTGCCTACCTCACAGCAAAATCTCTCTCACACGCCTACTTCATCAAGGAGTATTCTCTTGTCCCTGCAGAATCAGGTAAACTCAGCATCACCTTCACACCGTGTTCCAAACCCCGTGGATCATACGCTTTCATCAATGGCATTGAAGTTATTACTGTCCCTGACATGTTCACTCAACCACCACCTCTGGTCTCAACTCACCAATCCATTTCCATTGCCAACTCATCGTCGCAAACCATGTTTCGTTTGAACGTTGGTGGACAATACATTTCACCAGACAGAGATTCCGGTGGTCTCGGCAGAACATGGGACGATGATTCACATTACCTGTTCGCCGCAGCCTTTGGTGCCACTGCTGCGGCGGATAAGAATCTTACGATTCGATACGATTCTGATCTTCCAGAATACATTGCTCCTAAGGATGTTTACGCCACCGCAAGAACAATGGGTACTACTAATGCAGTGAATCTGAATTATAACCTCAGTTGGGTTTTTCAGGTTGATGCAAATTTCACCTACATTGTGAGGCTCCATTTTTGTGAGCTGTTTCTCAGCAAAATTAACCAGAGAGTGTTTAACATTTACGTTAACAATCAAACAGCAATAGAGGGTGCTGATGTTTATGGGTGGACTAAATCCAAAGGTGTTCCTATTTATCAAGATTTTGCCACTTTTGTTGTGGATGTACCTGGTGTTGATGATCAAGAATTGTGGGTGGAATTGCATCCGGCTAAGAAAACAAATCCACAGTATTCCGATGCAATTCTTAATGGGTTGGAGATATTCAAGATCAGTGACAGCAATGGAAACTTGGCACGGCCGAATCCTACGCCATCAAGTATGCTTCTTGATTCAGAATCAGAAGCTAAGAAAGGTAACAAAAAACATAGTAATCTAGCTGCAGTTATTTCTGCTGGAATGGTTCTTCTTGTTGTAGCTTTATGCTTACTTATTTACCTTAGAAAGAAGAGCATAGCTGATAGAAATGGAATTGTTCTTGGTAATTGGCTGGCCACACATGACTCGCCGAACCCATCAACTGAATATGGCCGCCATAAGAGTGGTGCTGGTTGTAGTATTTCAACACAAGGCTTATTATGCCAAAACTTTTCAATGGCAGAGATTAAACTCGCTACAGAGAACTTTGATGAATCACAGGTTATTGGTGTTGGTGGATTTGGGAAGGTTTACAAGGGTGTCATACAAGGAGTGAAAGAAGTTGCTGTGAAAAGATCTAATCCATCTTCAAATCAAGGAATCGACGAGTTTCAGAATGAAATTTACATGCTTTCAAAGCTAAGGCACAGGCATTTAGTCTCTCTAATTGGATTTTGCCAAGAAGATGGTGAAATGATTCTGGTTTATGATTACATGGCCAATGGAACTCTTCAGCAGCATCTCTACAAGAGTAACAAGCCATCTTTGCCATGGAATCAAAGGCTTGAAATATGTATCGGAGCCGCGAGAGGGCTTCACTACCTTCACACCGGTGCCAAGTTCACCATCATTCACCGGGATGTGAAAACATCAAATATCCTTTTGGATGAAAGTTGGGTAGCAAAAGTCTCTGATTTTGGTTTATCCAAAACTGGTCCAAACATGAATCAAACCCATGTCAGCACAATGGTGAAAGGTAGTTTTGGTTACTTTGATCCTGAATACTTTCGCAGGCAACAACTAACAGAGAAATCTGATGTTTACTCTTTTGGGGTGGTTCTGTTTGAGGTGTTATGTGCAAGGCCAGCACTTGATCCTAGATTGCCAAAAGAGCAAGTTAGTTTAGCTGATTGGGCTTTGATGAACCTAGAGAAAGGTTCACTTGAAGATATCATTGATCCTCATCTTCAAGGGAAGATTAGCATTGATTGTTTGCAAAAGTTTGGTGAGATTGCTAAGAAGTGTTTAGCTGATAATGGCCTTGAACGTCCTTCAATGGGTGATGTGCTGTGGACACTTGAGCTTGCACTTCAGCTGCAGAAGAAGAATCCTGATGCAGGAAAACTTGAAGGAAAGGAAATAGAGAAGGCACATGATGACTCAAGCAGCGTGTTCGATGACTCAAGTTCTAACGCAGTCTTTTCACTAATTGCTATGCCAACAGGAAGATAA 2544 0.4198 MRSNSQYPFSLINFFSIILITTARAEEPASKSFLISCGSSTGGTDSNGRKWLPDSKYLTAPSSIDTKSSTAKEQDPSIPSQTPYMSARVFTSSSSSSSTYQFPVSPNTRHYIRLHFYPSIYDSSLDPNNAYFSVHANGFTLLNNFSAYLTAKSLSHAYFIKEYSLVPAESGKLSITFTPCSKPRGSYAFINGIEVITVPDMFTQPPPLVSTHQSISIANSSSQTMFRLNVGGQYISPDRDSGGLGRTWDDDSHYLFAAAFGATAAADKNLTIRYDSDLPEYIAPKDVYATARTMGTTNAVNLNYNLSWVFQVDANFTYIVRLHFCELFLSKINQRVFNIYVNNQTAIEGADVYGWTKSKGVPIYQDFATFVVDVPGVDDQELWVELHPAKKTNPQYSDAILNGLEIFKISDSNGNLARPNPTPSSMLLDSESEAKKGNKKHSNLAAVISAGMVLLVVALCLLIYLRKKSIADRNGIVLGNWLATHDSPNPSTEYGRHKSGAGCSISTQGLLCQNFSMAEIKLATENFDESQVIGVGGFGKVYKGVIQGVKEVAVKRSNPSSNQGIDEFQNEIYMLSKLRHRHLVSLIGFCQEDGEMILVYDYMANGTLQQHLYKSNKPSLPWNQRLEICIGAARGLHYLHTGAKFTIIHRDVKTSNILLDESWVAKVSDFGLSKTGPNMNQTHVSTMVKGSFGYFDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALDPRLPKEQVSLADWALMNLEKGSLEDIIDPHLQGKISIDCLQKFGEIAKKCLADNGLERPSMGDVLWTLELALQLQKKNPDAGKLEGKEIEKAHDDSSSVFDDSSSNAVFSLIAMPTGR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61299g00004 847 Gene3D - 31 198 - -
Stsc61299g00004 847 Gene3D - 220 410 - -
Stsc61299g00004 847 FunFam Receptor-like protein kinase FERONIA 603 815 - -
Stsc61299g00004 847 Pfam Protein tyrosine and serine/threonine kinase 530 794 IPR001245 GO:0004672|GO:0006468
Stsc61299g00004 847 PANTHER OS03G0124300 PROTEIN-RELATED 10 467 IPR046957 GO:0004672
Stsc61299g00004 847 ProSiteProfiles Protein kinase domain profile. 527 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61299g00004 847 Pfam Malectin-like domain 35 409 IPR024788 -
Stsc61299g00004 847 CDD STKc_IRAK 533 798 - -
Stsc61299g00004 847 Gene3D Phosphorylase Kinase; domain 1 492 602 - -
Stsc61299g00004 847 Gene3D Transferase(Phosphotransferase) domain 1 603 823 - -
Stsc61299g00004 847 SMART serkin_6 527 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61299g00004 847 FunFam FERONIA receptor-like kinase 220 410 - -
Stsc61299g00004 847 FunFam receptor-like protein kinase FERONIA 491 602 - -
Stsc61299g00004 847 FunFam FERONIA receptor-like kinase 32 199 - -
Stsc61299g00004 847 SUPERFAMILY Protein kinase-like (PK-like) 507 799 IPR011009 -
Stsc61299g00004 847 MobiDBLite consensus disorder prediction 62 83 - -
Stsc61299g00004 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Stsc61299g00004 847 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61299g00004 Stsc-Chr61299 14215 16758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61299g00004 15 846 Receptor kinase-like Gene Family AT3G51550 52.069 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc61299g00004 Malectin_like 1.7e-43 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61299g00004 - - qsa:O6P43_003675 997.653