Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61277g00001 ATGATCATAAAGGTGAGAGAGTCAACAATGGTGCGTCCGGCGGAGGACGGGGCGCCGCCGCCGAAAAGTACGCTGTGGAATTCGAACGTGGATTTGGTGGTGCCGAACTTCCACACGCCGAGCGTGTACTTCTACCGTCCGAACGGCGCGTCGAATTTCTTCGACGCTAAGGTGATGAAGGAAGCGCTGAGCAAGGTTCTGGTGCCGTTTTATCCGATGGCTGGGAGGCTCCGACGTGATGAGGACGGTCGCGTTGAGATCGATTGCGGCGGTCAAGGGGTTCTGTTTGTGGAGGCGGAAACCGGCGGCGTCATCGACGATTTTGGGGATTTCGCGCCAACGCTTGAGCTCCGGCAACTAATCCCAGCCGTTGATTACTCACAAGGGATTGAATCGTATCCACTCTTGGTACTCCAGGTAACATATTTTAAATGTGGAGGAGTGTCACTAGGAGTGGGCATGCAGCACCATGTAGCAGATGGAGCTTCTGGTCTTCACTTCATCAACACATGGTCCGATGTAGCTCGCGGCCTTGAGGTGTCGATCCCACCGTTCATCGACCGGACACTACTCCGAGCAAGAGATCCGCCTAGGCCAGTCTTTGATCACATTGAATACAAACCTGCACCATCCATGAAAACACAAGCAGTGTCACAGCAACAACCTCAAAAACCAGGATCAGATGTTGCAGAGGTTTCTATTTTCAAGCTGACACGTGACCAACTCAACAAGTTGAAGGCAAAGAGTGTGTGCAAAGCAAGAGGACTTCCAATGGATCAAGAAACAAAGTTGTATATTGCCACCGATGGAAGGTCAAGGCTGCAGCCTCCTCTTCCTCCGGGCTACTTTGGCAATGTTATATTCACAACAACACCGATCGCCATCGCTGGCGATCTCATGTCAAAGCCCCTATGGTACACTGCAAGCAGAATCCACAATGCTCTGCAAAGGATGGACAATGATTATTTAAGGTCTGCTCTAGATTACTTGGAGCTGCAGCCTGATCTCAAGGCACTGGTTCGCGGCGCCCACACTTTCAAGTGTCCAAATCTAGGCATCACTAGCTGGGTTAGGCTTCCAATTCATGATGCTGATTTTGGTTGGGGAAGGCCTATTTTCATGGGGCCTGGAGGGATTGCTTATGAAGGATTGTCTTTTATAATTCCGAGTTCAACAAATTGTGGGAGCTTGTCTGTGGCAATTGCTCTTCAGCCTGATCACATGAAGGTGTTCAAGGAATTGATCTATGACATTTGA 1257 0.502 MIIKVRESTMVRPAEDGAPPPKSTLWNSNVDLVVPNFHTPSVYFYRPNGASNFFDAKVMKEALSKVLVPFYPMAGRLRRDEDGRVEIDCGGQGVLFVEAETGGVIDDFGDFAPTLELRQLIPAVDYSQGIESYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLEVSIPPFIDRTLLRARDPPRPVFDHIEYKPAPSMKTQAVSQQQPQKPGSDVAEVSIFKLTRDQLNKLKAKSVCKARGLPMDQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPIAIAGDLMSKPLWYTASRIHNALQRMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNCGSLSVAIALQPDHMKVFKELIYDI 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61277g00001 418 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 414 - -
Stsc61277g00001 418 MobiDBLite consensus disorder prediction 1 22 - -
Stsc61277g00001 418 FunFam Tryptamine hydroxycinnamoyl transferase 248 416 - -
Stsc61277g00001 418 Gene3D - 209 418 IPR023213 -
Stsc61277g00001 418 Gene3D - 1 208 IPR023213 -
Stsc61277g00001 418 Pfam Transferase family 3 249 - -
Stsc61277g00001 418 FunFam Spermidine hydroxycinnamoyl transferase 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61277g00001 Stsc-Chr61277 5557 9486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61277g00001 1 418 Monolignol Biosynthesis Gene Families AT5G48930 72.500 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61277g00001 K13065 - gmx:100820075 733.791