Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61266g00001 ATGTTCTTAGTTTGGCTAGCAGCTACAATATTGTTCCAAGCCATACTCACCAAAACTCGATCATCAAAGCTTCGAATTCCACCTGGTCCATTGGCCTTACCAATCATTGGACACTTCCATTTACTACAGCCATCTCTTCACAAAGCTGTTCAAAAGATTTCAAACCATTATGGACCCATTATTCAGCTCTATCTCGGCTCTAACCCCGGCGTCTTCGTCGTCTCGGCCGAAATAGCCAAAGAGATCTTGAAAACACATGAAATCTGTTTCGCCAACAGACCTGGAAACACCGTAATTAGTTTCCTAACTTATGGCAAATCCGATTTCGCGTTCGCGCCTTACGGAACCTTCTGGAAGTTCATGAAAAAGCTCTGCATGTCAGAGCTTCTTAATGGACGGATGCTTGATCAGCTCTCCCCGATCAGGGGAGAGGAGATCAAGAGATTCCTGGAGACGCTTCGAAAGAAAGGCGAAGCGAACGAGGGTGTGAACTTAGCAGATGAGCTCTTAAAGCTAACGAATAGCACAGTGATGAGAATGGCTATAAGCAAAAGCTGCTTTGATAGCCACCACCATGATGAAGCTGATAAGGTGATACAAAGGGTTAAGGAATCGTCCATGTTGAGTGCGAAATTTAACTTGCAAGATCACTTTTGGTTTTGTAAAGGGTTTGATTTTCAAGGCTTTGGGAAGAGAATGAAGGAGGTTCGTGGAAAGTTTGATGTGATGTTAGAGGGTATCATCCGAGAACATGAAGAGGATAGAAGAAGTCAAAAGTCAACGGCAAATAATAATCATGGTGCAAAGGATGTGCTTGATGCTATTCTAAGAATTTCAGAAGATCCAAGCTCGGAGGTTAAAATAACTAGAGACAATATCAAAGGCTTCTTGATGGATATGTTGTCAGGTGGAACAGATACGACTGCAGTAACAGTAGAATGGGCACTTGCAGAACTAATTAACCACCCAACTGCCATGGAGAAAGCAAGAAAAGAAATTGATTCATTAGTAACAAGCAGTGGAAAACACAGAATAGTGATGGAATCTGACATACAAAAACTTCCTTACATCCAAGCCATAGTTAAAGAAACACTAAGGCTTCACCCTCCAGCACCCTTCATAATGAGAGCCCCATCTGAGAACTGCACCATTGCAGGGTTTCACATTCCAGCAAGAACCAAAGTCTTCATAAACGTGTGGGCCATTGGAAGAGATCCAAAGAATTGGGATGACCCTCTGGAGTTCAAACCTGAAAGGTTTCTTCTGGGTCAAGGCTTTGAAGTTAGAGGTCAACATTATCAACTCTTGCCCTTTGGAAGTGGAAGAAGAGGATGTCCTGGAACATCGTTAGCACTCAATGTTGCTCATACATGCCTTGCTACTATGATTCAGTGCTTTGAGTGGAAGGTTGTTGGAGATGGTGATGGTGTTGGTGGTGGTGTTGATATGGAAGAAGGACCTTCATTCATTCTTTCAAGGGCTAAACCACTTATTTGTGTCCCAAAACCAAGGCTTATGCCTTTTCCATCCCTCTCTTAA 1539 0.4295 MFLVWLAATILFQAILTKTRSSKLRIPPGPLALPIIGHFHLLQPSLHKAVQKISNHYGPIIQLYLGSNPGVFVVSAEIAKEILKTHEICFANRPGNTVISFLTYGKSDFAFAPYGTFWKFMKKLCMSELLNGRMLDQLSPIRGEEIKRFLETLRKKGEANEGVNLADELLKLTNSTVMRMAISKSCFDSHHHDEADKVIQRVKESSMLSAKFNLQDHFWFCKGFDFQGFGKRMKEVRGKFDVMLEGIIREHEEDRRSQKSTANNNHGAKDVLDAILRISEDPSSEVKITRDNIKGFLMDMLSGGTDTTAVTVEWALAELINHPTAMEKARKEIDSLVTSSGKHRIVMESDIQKLPYIQAIVKETLRLHPPAPFIMRAPSENCTIAGFHIPARTKVFINVWAIGRDPKNWDDPLEFKPERFLLGQGFEVRGQHYQLLPFGSGRRGCPGTSLALNVAHTCLATMIQCFEWKVVGDGDGVGGGVDMEEGPSFILSRAKPLICVPKPRLMPFPSLS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61266g00001 512 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 PRINTS E-class P450 group I signature 78 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 FunFam Cytochrome P450 family protein 18 499 - -
Stsc61266g00001 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 500 - -
Stsc61266g00001 512 Pfam Cytochrome P450 27 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Stsc61266g00001 512 Gene3D Cytochrome P450 12 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61266g00001 512 CDD CYP93 58 501 - -
Stsc61266g00001 512 SUPERFAMILY Cytochrome P450 27 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61266g00001 Stsc-Chr61266 15782 18662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61266g00001 1 501 Cytochrome P450 AT5G06900 48.303 9.90e-172 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61266g00001 K24188 - qsa:O6P43_006564 628.246